RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-201ENST00000333371 IMMTQ16891 758 aaKnown RBP14.34□□□□□ -0.11
VPS33B-201ENST00000333371 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 MB21D2Q8IYB1 491 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-201ENST00000333371 STARD3NLO95772 234 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 CCDC158Q5M9N0 1113 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 SENP2Q9HC62 589 aa14.34□□□□□ -0.11
VPS33B-201ENST00000333371 MYH7P12883 1935 aa14.33□□□□□ -0.11
VPS33B-201ENST00000333371 ITGB4P16144 1822 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 UBE2Q2LH0YL09 131 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 SPTLC2O15270 562 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 SMC2O95347 1197 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 RBM6P78332 1123 aaKnown RBP14.33□□□□□ -0.12
VPS33B-201ENST00000333371 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 XPO4Q9C0E2 1151 aaKnown RBP14.33□□□□□ -0.12
VPS33B-201ENST00000333371 IFNKQ9P0W0 207 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 KIAA1468Q9P260 1216 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 MROH7-TTC4A0A0A0MT08 1334 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 CPLX1O14810 134 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 GPAA1O43292 621 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 PTPN14Q15678 1187 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 NBPF3Q9H094 633 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
VPS33B-201ENST00000333371 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
VPS33B-201ENST00000333371 EXOC5O00471 708 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 NPHP1O15259 732 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 WDHD1O75717 1129 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-201ENST00000333371 NYAP1Q6ZVC0 841 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 CIAO1O76071 339 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 ZNF202O95125 648 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 EVCP57679 992 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 TMC6Q7Z403 805 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 CCAR2Q8N163 923 aaKnown RBP14.32□□□□□ -0.12
VPS33B-201ENST00000333371 ATG3Q9NT62 314 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 PAXBP1Q9Y5B6 917 aa14.32□□□□□ -0.12
VPS33B-201ENST00000333371 GPTP24298 496 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 DMTNQ08495 405 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
VPS33B-201ENST00000333371 PHKBQ93100 1093 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 AKAP11Q9UKA4 1901 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 PFKFB1P16118 471 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
VPS33B-201ENST00000333371 MCAMP43121 646 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 ARMCX5Q6P1M9 558 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 CTNNA3Q9UI47 895 aa14.31□□□□□ -0.12
VPS33B-201ENST00000333371 A0A0G2JS52 829 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 ZNF213O14771 459 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 SLC3A2P08195 630 aaKnown RBP14.3□□□□□ -0.12
VPS33B-201ENST00000333371 ATP1A3P13637 1013 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-201ENST00000333371 TCIRG1Q13488 830 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 ZRSR1Q15695 479 aaKnown RBP14.3□□□□□ -0.12
VPS33B-201ENST00000333371 AXDND1Q5T1B0 1012 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-201ENST00000333371 CYB5R4Q7L1T6 521 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 TBC1D10CQ8IV04 446 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 NCOA7Q8NI08 942 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 APPBP2Q92624 585 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 MYL10Q9BUA6 226 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 NAT10Q9H0A0 1025 aaKnown RBP14.3□□□□□ -0.12
VPS33B-201ENST00000333371 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 C4BP0C0L5 1744 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 SPEF2Q9C093 1822 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 A0A1W2PQ27 194 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 A0A1W2PQ64 194 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 A0A1W2PQD8 194 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 ANO1Q5XXA6 986 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
VPS33B-201ENST00000333371 E4F1Q66K89 784 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-201ENST00000333371 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 DISP2A7MBM2 1401 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 ADAMTS2O95450 1211 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 APPP05067 770 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 GOLGA8FQ08AF8 430 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 GOLGA8DPQ0D2H9 430 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 NCAPHQ15003 741 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 LRRN4CLQ8ND94 238 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 CLIC6Q96NY7 704 aa14.29□□□□□ -0.12
VPS33B-201ENST00000333371 DDX60Q8IY21 1712 aaKnown RBP14.29□□□□□ -0.12
VPS33B-201ENST00000333371 AHDC1Q5TGY3 1603 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-201ENST00000333371 CDC27P30260 824 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 METTL24Q5JXM2 366 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 MICU3Q86XE3 530 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 B4E1Z4 1266 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 NEMFO60524 1076 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 IDH1O75874 414 aaKnown RBP14.28□□□□□ -0.12
VPS33B-201ENST00000333371 YEATS4O95619 227 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
VPS33B-201ENST00000333371 ELF2Q15723 593 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 SLC9C2Q5TAH2 1124 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS33B-201ENST00000333371 GREM2Q9H772 168 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 COL16A1Q07092 1604 aaPredicted RBP14.28□□□□□ -0.12
VPS33B-201ENST00000333371 HLFQ16534 295 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms