RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MAGEA9P43362 315 aa20.93■□□□□ 0.94
PKP3-201ENST00000331563 SNRPA1P09661 255 aaKnown RBP20.92■□□□□ 0.94
PKP3-201ENST00000331563 IL2RBP14784 551 aa20.92■□□□□ 0.94
PKP3-201ENST00000331563 GPR161Q8N6U8 529 aaKnown RBP20.92■□□□□ 0.94
PKP3-201ENST00000331563 EXOC4Q96A65 974 aa20.92■□□□□ 0.94
PKP3-201ENST00000331563 A0A0D9SFI3 127 aa20.92■□□□□ 0.94
PKP3-201ENST00000331563 DHX8Q14562 1220 aaKnown RBP20.92■□□□□ 0.94
PKP3-201ENST00000331563 REXO1L1PQ8IX06 675 aa20.92■□□□□ 0.94
PKP3-201ENST00000331563 SUCLG2Q96I99 432 aa20.92■□□□□ 0.94
PKP3-201ENST00000331563 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
PKP3-201ENST00000331563 A0A1B0GVL5 298 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 KCNJ6P48051 423 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 GUCY1B3Q02153 619 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 ZNF396Q96N95 335 aaPredicted RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 PARP3Q9Y6F1 533 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 SCN11AQ9UI33 1791 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 USP42Q9H9J4 1324 aaKnown RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 SIPA1L3O60292 1781 aaPredicted RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 ACTN2P35609 894 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 TRIM65Q6PJ69 517 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 LRRC2Q9BYS8 371 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 GNG11P61952 73 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 SF3A1Q15459 793 aaKnown RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 Q6ZUG5 572 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 IQUBQ8NA54 791 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 PARD6BQ9BYG5 372 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 BICC1Q9H694 974 aaKnown RBP20.91■□□□□ 0.94
PKP3-201ENST00000331563 DONSONQ9NYP3 566 aa20.91■□□□□ 0.94
PKP3-201ENST00000331563 OVOS2A0A0G2JMS6 1433 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 A1BGP04217 495 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 CCDC91Q7Z6B0 441 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 ENGASEQ8NFI3 743 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 VPS18Q9P253 973 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 PPP2R3AQ06190 1150 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 ISM2Q6H9L7 571 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 BOLA2Q9H3K6 86 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 PXDNLA1KZ92 1463 aa20.9■□□□□ 0.94
PKP3-201ENST00000331563 PATL2C9JE40 543 aaKnown RBP20.89■□□□□ 0.94
PKP3-201ENST00000331563 GRM8O00222 908 aa20.89■□□□□ 0.94
PKP3-201ENST00000331563 DDX58O95786 925 aaKnown RBP20.89■□□□□ 0.94
PKP3-201ENST00000331563 ADD1P35611 737 aaKnown RBP20.89■□□□□ 0.94
PKP3-201ENST00000331563 MCM6Q14566 821 aa20.89■□□□□ 0.94
PKP3-201ENST00000331563 MRPS27Q92552 414 aaKnown RBP20.89■□□□□ 0.94
PKP3-201ENST00000331563 CXorf56Q9H5V9 222 aa20.89■□□□□ 0.94
PKP3-201ENST00000331563 C5P01031 1676 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 ZSCAN12O43309 604 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 GOLGA8FQ08AF8 430 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 GOLGA8DPQ0D2H9 430 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 ANKRD13DQ6ZTN6 518 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 LINS1Q8NG48 757 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 CCDC8Q9H0W5 538 aaPredicted RBP20.89■□□□□ 0.93
PKP3-201ENST00000331563 ZSWIM4Q9H7M6 989 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 PSD3Q9NYI0 1048 aa20.89■□□□□ 0.93
PKP3-201ENST00000331563 SERPINC1P01008 464 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 NEK1Q96PY6 1258 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 FUT8Q9BYC5 575 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 KIAA1468Q9P260 1216 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 FANCCQ00597 558 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 EPHA10Q5JZY3 1008 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 PCDH11XQ9BZA7 1347 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 PCDH11YQ9BZA8 1340 aa20.88■□□□□ 0.93
PKP3-201ENST00000331563 FANCGO15287 622 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 HMG20BQ9P0W2 317 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 H3BQF6 201 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 ADAMTS2O95450 1211 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 IVLP07476 585 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 E2F4Q16254 413 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 LONRF2Q1L5Z9 754 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 CFAP100Q494V2 611 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 LRP10Q7Z4F1 713 aa20.87■□□□□ 0.93
PKP3-201ENST00000331563 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 PTPN21Q16825 1174 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 NBPF14Q5TI25 921 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
PKP3-201ENST00000331563 ZNF589Q86UQ0 364 aaPredicted RBP20.86■□□□□ 0.93
PKP3-201ENST00000331563 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 ALDH8A1Q9H2A2 487 aaPredicted RBP20.86■□□□□ 0.93
PKP3-201ENST00000331563 NDUFA8P51970 172 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 UBASH3AP57075 661 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 SCRN1Q12765 414 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 KRT32Q14532 448 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 ERC1Q8IUD2 1116 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 A0A0G2JS52 829 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 NEURL1BA8MQ27 555 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
PKP3-201ENST00000331563 ATP1A3P13637 1013 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 GSCP56915 257 aaPredicted RBP20.86■□□□□ 0.93
PKP3-201ENST00000331563 TTLL7Q6ZT98 887 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 MPHOSPH8Q99549 860 aa20.86■□□□□ 0.93
PKP3-201ENST00000331563 ALDH1L1O75891 902 aa20.85■□□□□ 0.93
PKP3-201ENST00000331563 FMR1NBQ8N0W7 255 aaPredicted RBP20.85■□□□□ 0.93
PKP3-201ENST00000331563 GOLGA1Q92805 767 aa20.85■□□□□ 0.93
PKP3-201ENST00000331563 PCDHA7Q9UN72 937 aa20.85■□□□□ 0.93
PKP3-201ENST00000331563 CCT2P78371 535 aaKnown RBP20.85■□□□□ 0.93
PKP3-201ENST00000331563 SWT1Q5T5J6 900 aaKnown RBP20.85■□□□□ 0.93
PKP3-201ENST00000331563 SUGP1Q8IWZ8 645 aaKnown RBP20.85■□□□□ 0.93
PKP3-201ENST00000331563 PDE11AQ9HCR9 933 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms