RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 UQCRHP07919 91 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
SYNM-201ENST00000328642 NECTIN1Q15223 517 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 VSIG10Q8N0Z9 540 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 LEO1Q8WVC0 666 aaPredicted RBP18.54■□□□□ 0.56
SYNM-201ENST00000328642 CDK5RAP3Q96JB5 506 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 AIFM3Q96NN9 605 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 HIBADHP31937 336 aaKnown RBP18.53■□□□□ 0.56
SYNM-201ENST00000328642 SYKP43405 635 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 WASF1Q92558 559 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 AOPEPQ8N6M6 819 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 ANKRD20A12PQ8NF67 263 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 ZDHHC9Q9Y397 364 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 TXLNAP40222 546 aa18.53■□□□□ 0.56
SYNM-201ENST00000328642 ANGEL1Q9UNK9 670 aaKnown RBP18.53■□□□□ 0.56
SYNM-201ENST00000328642 UFL1O94874 794 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 TSPY3P0CV98 308 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 TSPY8P0CW00 308 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 PDE4BQ07343 736 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 PARP10Q53GL7 1025 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 STAMQ92783 540 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 GTF3C6Q969F1 213 aa18.52■□□□□ 0.56
SYNM-201ENST00000328642 USP17L12C9JPN9 530 aa18.52■□□□□ 0.55
SYNM-201ENST00000328642 USP17L21D6R901 530 aa18.52■□□□□ 0.55
SYNM-201ENST00000328642 USP28Q96RU2 1077 aa18.52■□□□□ 0.55
SYNM-201ENST00000328642 CABP5Q9NP86 173 aa18.52■□□□□ 0.55
SYNM-201ENST00000328642 V9GY48 417 aaPredicted RBP18.52■□□□□ 0.55
SYNM-201ENST00000328642 MRPS27Q92552 414 aaKnown RBP18.51■□□□□ 0.55
SYNM-201ENST00000328642 KRT23Q9C075 422 aa18.51■□□□□ 0.55
SYNM-201ENST00000328642 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
SYNM-201ENST00000328642 TM6SF1Q9BZW5 370 aa18.51■□□□□ 0.55
SYNM-201ENST00000328642 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
SYNM-201ENST00000328642 FAM196AQ6ZSG2 479 aa18.51■□□□□ 0.55
SYNM-201ENST00000328642 BAG3O95817 575 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 MCAMP43121 646 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 STX17P56962 302 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 DYNLL1P63167 89 aaKnown RBP18.5■□□□□ 0.55
SYNM-201ENST00000328642 MTX1Q13505 466 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 HEATR3Q7Z4Q2 680 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
SYNM-201ENST00000328642 LDHBP07195 334 aaKnown RBP18.5■□□□□ 0.55
SYNM-201ENST00000328642 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 ZC3H12CQ9C0D7 883 aaKnown RBP18.5■□□□□ 0.55
SYNM-201ENST00000328642 PIH1D3Q9NQM4 214 aaKnown RBP18.5■□□□□ 0.55
SYNM-201ENST00000328642 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 NR1I2O75469 434 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 ST5P78524 1137 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 MAPKAPK5Q8IW41 473 aa18.5■□□□□ 0.55
SYNM-201ENST00000328642 KRT18P05783 430 aaKnown RBP18.49■□□□□ 0.55
SYNM-201ENST00000328642 FOXO4P98177 505 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 TRIM37O94972 964 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 IL6STP40189 918 aaPredicted RBP18.49■□□□□ 0.55
SYNM-201ENST00000328642 DHX58Q96C10 678 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 TCEAL9Q9UHQ7 104 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 PXDNQ92626 1479 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 IFNL3Q8IZI9 196 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 FAM200AQ8TCP9 573 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 CEMIPQ8WUJ3 1361 aa18.49■□□□□ 0.55
SYNM-201ENST00000328642 PTGS1P23219 599 aa18.48■□□□□ 0.55
SYNM-201ENST00000328642 CUL4AQ13619 759 aa18.48■□□□□ 0.55
SYNM-201ENST00000328642 NAP1L1P55209 391 aaKnown RBP18.48■□□□□ 0.55
SYNM-201ENST00000328642 ZNF174Q15697 407 aa18.48■□□□□ 0.55
SYNM-201ENST00000328642 PDIA3P30101 505 aaKnown RBP18.48■□□□□ 0.55
SYNM-201ENST00000328642 CYP19A1P11511 503 aaPredicted RBP18.47■□□□□ 0.55
SYNM-201ENST00000328642 RASGRF1Q13972 1273 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 DSCC1Q9BVC3 393 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 SEC63Q9UGP8 760 aaKnown RBP18.47■□□□□ 0.55
SYNM-201ENST00000328642 ERBB4Q15303 1308 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 NYXQ9GZU5 481 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 VPS54Q9P1Q0 977 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 RIMS1Q86UR5 1692 aaKnown RBP18.47■□□□□ 0.55
SYNM-201ENST00000328642 KRT40Q6A162 431 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 CNNM2Q9H8M5 875 aa18.47■□□□□ 0.55
SYNM-201ENST00000328642 MCM7P33993 719 aa18.46■□□□□ 0.55
SYNM-201ENST00000328642 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
SYNM-201ENST00000328642 RGS12O14924 1447 aa18.46■□□□□ 0.55
SYNM-201ENST00000328642 ENOX2Q16206 610 aaKnown RBP18.46■□□□□ 0.55
SYNM-201ENST00000328642 STX1AQ16623 288 aa18.46■□□□□ 0.55
SYNM-201ENST00000328642 DIS3L2Q8IYB7 885 aaKnown RBP18.46■□□□□ 0.55
SYNM-201ENST00000328642 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
SYNM-201ENST00000328642 IDEP14735 1019 aa18.46■□□□□ 0.55
SYNM-201ENST00000328642 CDCA7Q9BWT1 371 aaPredicted RBP18.46■□□□□ 0.55
SYNM-201ENST00000328642 TCP10Q12799 353 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 PTPN21Q16825 1174 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 MAPK8IP1Q9UQF2 711 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 IPO7O95373 1038 aaKnown RBP18.45■□□□□ 0.54
SYNM-201ENST00000328642 CYP2E1P05181 493 aaPredicted RBP18.45■□□□□ 0.54
SYNM-201ENST00000328642 LDHCP07864 332 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 MNS1Q8NEH6 495 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 PDIA4P13667 645 aaKnown RBP18.45■□□□□ 0.54
SYNM-201ENST00000328642 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
SYNM-201ENST00000328642 LCORLQ8N3X6 602 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
SYNM-201ENST00000328642 TPM2P07951 284 aa18.44■□□□□ 0.54
SYNM-201ENST00000328642 SFPQP23246 707 aaKnown RBP eCLIP18.44■□□□□ 0.54
SYNM-201ENST00000328642 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms