RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 DDX3YO15523 660 aaKnown RBP2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 GADD45BO75293 160 aaPredicted RBP2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 IGHA2P01877 340 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 ESRRAP11474 423 aaPredicted RBP2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 ANKRD34AQ69YU3 496 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 ZSCAN29Q8IWY8 852 aaPredicted RBP2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 TCF12Q99081 682 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 RUSC1Q9BVN2 902 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 USP26Q9BXU7 913 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 TRAK1Q9UPV9 953 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 DIP2BQ9P265 1576 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 SART1O43290 800 aaKnown RBP2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 PCDH1Q08174 1060 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 PRSS36Q5K4E3 855 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 FDX2Q6P4F2 183 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 PRR23CQ6ZRP0 262 aa2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 DDX54Q8TDD1 881 aaKnown RBP2.99□□□□□ -1.93
CCDC144A-201ENST00000328495 YTHDC2Q9H6S0 1430 aaKnown RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 DHX15O43143 795 aaKnown RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 GRIA4P48058 902 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 GSTM4Q03013 218 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 SPRED3Q2MJR0 410 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 HP1BP3Q5SSJ5 553 aaPredicted RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 UTP4Q969X6 686 aaKnown RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 NLRP2Q9NX02 1062 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 ITGB7P26010 798 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 ZMYM1Q5SVZ6 1142 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 HGSNATQ68CP4 663 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 PRPF40BQ6NWY9 871 aaKnown RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 SNX27Q96L92 541 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 TREHO43280 583 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 ITPKAP23677 461 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 PLCB3Q01970 1234 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 PTPN12Q05209 780 aaKnown RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 UBL7Q96S82 380 aaPredicted RBP2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 ZNF576Q9H609 170 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 ZFYVE1Q9HBF4 777 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 PPP4R2Q9NY27 417 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 RAXQ9Y2V3 346 aa2.98□□□□□ -1.93
CCDC144A-201ENST00000328495 PNMA6FA0A0J9YX94 578 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 LOC100289279A0A1B0GTE1 492 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 GSC2O15499 205 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 GAS2O43903 313 aaKnown RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 CYP11A1P05108 521 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 PDIA4P13667 645 aaKnown RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 C1QTNF8P60827 252 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 NUTM2GQ5VZR2 741 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 FAM46AQ96IP4 442 aaKnown RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 CYP4F12Q9HCS2 524 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 ABCB6Q9NP58 842 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 MEGF11A6BM72 1044 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 B3GALT4O96024 378 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 DSC3Q14574 896 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 ENOX2Q16206 610 aaKnown RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 RPS26P11Q5JNZ5 115 aaPredicted RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 MYRFLQ96LU7 910 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 ASB16Q96NS5 453 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 HIF3AQ9Y2N7 669 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 TMEM238LA0A1B0GVL6 79 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 SCO2A0A1W2PP80 73 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 PREPP48147 710 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 ATP2B2Q01814 1243 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 GRM2Q14416 872 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 ZNF423Q2M1K9 1284 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 EPS8L3Q8TE67 593 aaKnown RBP2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 FBF1Q8TES7 1133 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 ABCC10Q5T3U5 1492 aa2.97□□□□□ -1.93
CCDC144A-201ENST00000328495 PPRC1Q5VV67 1664 aaKnown RBP2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 ADAMTS7Q9UKP4 1686 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 XRCC5P13010 732 aaKnown RBP2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 FSTP19883 344 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 MAPK8P45983 427 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 HNRNPUQ00839 825 aaKnown RBP eCLIP2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 AP3B2Q13367 1082 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 POU4F3Q15319 338 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 ARMC10Q8N2F6 343 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 SMG8Q8ND04 991 aaKnown RBP2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 CORO1BQ9BR76 489 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 TMPRSS13Q9BYE2 586 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 SUGCTQ9HAC7 445 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 STOML1Q9UBI4 398 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 KIF21AQ7Z4S6 1674 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 FMR1Q06787 632 aaKnown RBP eCLIP2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 EXOSC6Q5RKV6 272 aaKnown RBP2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 DTHD1Q6ZMT9 781 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 AEBP1Q8IUX7 1158 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 NRSN2Q9GZP1 204 aa2.96□□□□□ -1.94
CCDC144A-201ENST00000328495 MAOBP27338 520 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 FCGRTP55899 365 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 FAM20CQ8IXL6 584 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 C12orf50Q8NA57 414 aaPredicted RBP2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 BMP3P12645 472 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 PPP2R3AQ06190 1150 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 ALG1LQ6GMV1 187 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 PI16Q6UXB8 463 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 CLEC10AQ8IUN9 316 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms