RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 MEIS3Q99687 375 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 SYT1P21579 422 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 FCHSD1Q86WN1 690 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 NUCKS1Q9H1E3 243 aaKnown RBP15□□□□□ -0.01
TRAK1-201ENST00000327628 ATP10BO94823 1461 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 ARHGEF10O15013 1369 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 CALCOCO2Q13137 446 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 SIRT1Q96EB6 747 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 TSKSQ9UJT2 592 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 LUC7L2Q9Y383 392 aaKnown RBP14.99□□□□□ -0.01
TRAK1-201ENST00000327628 MAP3K9P80192 1104 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 NOX5Q96PH1 765 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 LIN9Q5TKA1 542 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 WDR66Q8TBY9 1149 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 GSTA5Q7RTV2 222 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.99□□□□□ -0.01
TRAK1-201ENST00000327628 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
TRAK1-201ENST00000327628 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 USP48Q86UV5 1035 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 AFMP43652 599 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 MAP7D1Q3KQU3 841 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 AFAP1L2Q8N4X5 818 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 TCHPQ9BT92 498 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 MCM9Q9NXL9 1143 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 TTF2Q9UNY4 1162 aaKnown RBP14.98□□□□□ -0.01
TRAK1-201ENST00000327628 ATP6V0A2Q9Y487 856 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 PLXNC1O60486 1568 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 RNMTO43148 476 aaKnown RBP14.98□□□□□ -0.01
TRAK1-201ENST00000327628 MAP7Q14244 749 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 PUM3Q15397 648 aaKnown RBP14.98□□□□□ -0.01
TRAK1-201ENST00000327628 MPNDQ8N594 471 aa14.98□□□□□ -0.01
TRAK1-201ENST00000327628 ZMYM3Q14202 1370 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 STK10O94804 968 aaKnown RBP14.97□□□□□ -0.01
TRAK1-201ENST00000327628 IBSPP21815 317 aaPredicted RBP14.97□□□□□ -0.01
TRAK1-201ENST00000327628 DNA2P51530 1060 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 MMRN2Q9H8L6 949 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 SWAP70Q9UH65 585 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 MYL5Q02045 173 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 KRT25Q7Z3Z0 450 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 YWHAEP62258 255 aaKnown RBP14.97□□□□□ -0.01
TRAK1-201ENST00000327628 TYRO3Q06418 890 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 NOLC1Q14978 699 aaKnown RBP eCLIP14.97□□□□□ -0.01
TRAK1-201ENST00000327628 AOPEPQ8N6M6 819 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 SETDB1Q15047 1291 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 CCDC6Q16204 474 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 ZNF710Q8N1W2 664 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 DHX58Q96C10 678 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 FAM169AQ9Y6X4 670 aa14.97□□□□□ -0.01
TRAK1-201ENST00000327628 PTPDC1A2A3K4 754 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 TBC1D22AQ8WUA7 517 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 IFT74Q96LB3 600 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 DACT1Q9NYF0 836 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
TRAK1-201ENST00000327628 UBXN1Q04323 297 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 RAB3GAP1Q15042 981 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 MSL1Q68DK7 614 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.01
TRAK1-201ENST00000327628 HCLS1P14317 486 aaPredicted RBP14.96□□□□□ -0.01
TRAK1-201ENST00000327628 FAM160A1Q05DH4 1040 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 MAK16Q9BXY0 300 aaKnown RBP14.96□□□□□ -0.01
TRAK1-201ENST00000327628 ZKSCAN5Q9Y2L8 839 aa14.96□□□□□ -0.01
TRAK1-201ENST00000327628 KIAA0556O60303 1618 aa14.96□□□□□ -0.02
TRAK1-201ENST00000327628 TAOK1Q7L7X3 1001 aa14.96□□□□□ -0.02
TRAK1-201ENST00000327628 MKRN1Q9UHC7 482 aaKnown RBP14.96□□□□□ -0.02
TRAK1-201ENST00000327628 PDE8AO60658 829 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 HOXA7P31268 230 aaPredicted RBP14.95□□□□□ -0.02
TRAK1-201ENST00000327628 DAAM2Q86T65 1068 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 FAM184BQ9ULE4 1060 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 EYA2O00167 538 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 CUTAO60888 179 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 GMNNO75496 209 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
TRAK1-201ENST00000327628 TRAPPC3LQ5T215 181 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 IWS1Q96ST2 819 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 POLKQ9UBT6 870 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 ACTN4O43707 911 aaKnown RBP14.95□□□□□ -0.02
TRAK1-201ENST00000327628 NOL3O60936 208 aaKnown RBP14.95□□□□□ -0.02
TRAK1-201ENST00000327628 CLCN1P35523 988 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 MXRA7P84157 204 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 CCDC121Q6ZUS5 278 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 NBPF11Q86T75 865 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 C16orf71Q8IYS4 520 aaPredicted RBP14.95□□□□□ -0.02
TRAK1-201ENST00000327628 MAGEB6Q8N7X4 407 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 IMPACTQ9P2X3 320 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 CNPY2Q9Y2B0 182 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 MROH5Q6ZUA9 1318 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 C10orf67Q8IYJ2 551 aa14.95□□□□□ -0.02
TRAK1-201ENST00000327628 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
TRAK1-201ENST00000327628 METTL22Q9BUU2 404 aaPredicted RBP14.94□□□□□ -0.02
TRAK1-201ENST00000327628 PODXL2Q9NZ53 605 aa14.94□□□□□ -0.02
TRAK1-201ENST00000327628 DNAI1Q9UI46 699 aa14.94□□□□□ -0.02
TRAK1-201ENST00000327628 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
TRAK1-201ENST00000327628 AKR1B15C9JRZ8 316 aaPredicted RBP14.94□□□□□ -0.02
TRAK1-201ENST00000327628 GIMAP6Q6P9H5 292 aa14.94□□□□□ -0.02
TRAK1-201ENST00000327628 FNBP1Q96RU3 617 aa14.94□□□□□ -0.02
TRAK1-201ENST00000327628 SAMD15Q9P1V8 674 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms