RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RGPD8O14715 1765 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 EIF3CLB5ME19 914 aaKnown RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 POLR3DP05423 398 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 GUCY2CP25092 1073 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 MCM6Q14566 821 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 PAXIP1Q6ZW49 1069 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 TC2NQ8N9U0 490 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 ZNF274Q96GC6 653 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 EIF3CQ99613 913 aaKnown RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 DBNLQ9UJU6 430 aaKnown RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 JRKLQ9Y4A0 524 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 CUTAO60888 179 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 MYSM1Q5VVJ2 828 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 HDXQ7Z353 690 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 SRGAP1Q7Z6B7 1085 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 MSANTD4Q8NCY6 345 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 PNKPQ96T60 521 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 FANCLQ9NW38 375 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 FAN1Q9Y2M0 1017 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 CHMP4BP1P59074 171 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 CCDC12Q8WUD4 166 aaPredicted RBP14.7□□□□□ -0.06
CCDC60-201ENST00000327554 SLC26A8Q96RN1 970 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 ZSWIM4Q9H7M6 989 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 L1RE1Q9UN81 338 aa14.7□□□□□ -0.06
CCDC60-201ENST00000327554 A0A0G2JLW4 131 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 MYO1BO43795 1136 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 WDHD1O75717 1129 aaPredicted RBP14.69□□□□□ -0.06
CCDC60-201ENST00000327554 USHBP1Q8N6Y0 703 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 MRPL44Q9H9J2 332 aaKnown RBP14.69□□□□□ -0.06
CCDC60-201ENST00000327554 AKAP2Q9Y2D5 859 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 CORO7P57737 925 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 TEFQ10587 303 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 KARSQ15046 597 aaKnown RBP14.69□□□□□ -0.06
CCDC60-201ENST00000327554 DESI2Q9BSY9 194 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 IRX2Q9BZI1 471 aaPredicted RBP14.69□□□□□ -0.06
CCDC60-201ENST00000327554 LMO7Q8WWI1 1683 aa14.69□□□□□ -0.06
CCDC60-201ENST00000327554 SH3TC1Q8TE82 1336 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 ANO1Q5XXA6 986 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 SUGCTQ9HAC7 445 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 KIF28PB7ZC32 967 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 E7EWF7 191 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 PNOCQ13519 176 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 MLECQ14165 292 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 LRRC31Q6UY01 552 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 BRAPQ7Z569 592 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 LTV1Q96GA3 475 aaPredicted RBP14.68□□□□□ -0.06
CCDC60-201ENST00000327554 ABCB6Q9NP58 842 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 MKRN1Q9UHC7 482 aaKnown RBP14.68□□□□□ -0.06
CCDC60-201ENST00000327554 HPSEQ9Y251 543 aa14.68□□□□□ -0.06
CCDC60-201ENST00000327554 EIF3JO75822 258 aaKnown RBP14.67□□□□□ -0.06
CCDC60-201ENST00000327554 CHRM1P11229 460 aaPredicted RBP14.67□□□□□ -0.06
CCDC60-201ENST00000327554 SYKP43405 635 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 ADKP55263 362 aaKnown RBP14.67□□□□□ -0.06
CCDC60-201ENST00000327554 CHST3Q7LGC8 479 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 PDILTQ8N807 584 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 CHMP4CQ96CF2 233 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 C8orf76Q96K31 380 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 DIP2BQ9P265 1576 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 TEX2Q8IWB9 1127 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 PUF60Q9UHX1 559 aaKnown RBP14.67□□□□□ -0.06
CCDC60-201ENST00000327554 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
CCDC60-201ENST00000327554 DDX60Q8IY21 1712 aaKnown RBP14.66□□□□□ -0.06
CCDC60-201ENST00000327554 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 PDE4BQ07343 736 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 WWC2Q6AWC2 1192 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 DDX46Q7L014 1031 aaKnown RBP14.66□□□□□ -0.06
CCDC60-201ENST00000327554 PPM1EQ8WY54 764 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 HAUS7Q99871 368 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 GJB4Q9NTQ9 266 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 CDC23Q9UJX2 597 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 ANKARQ7Z5J8 1434 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 BTBD11A6QL63 1104 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 MTF1Q14872 753 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 SPECC1LQ69YQ0 1117 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 NCAPGQ9BPX3 1015 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 DSCC1Q9BVC3 393 aa14.66□□□□□ -0.06
CCDC60-201ENST00000327554 ERLIN1O75477 346 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 BMP6P22004 513 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 MARCKSP29966 332 aaPredicted RBP14.65□□□□□ -0.06
CCDC60-201ENST00000327554 CDC27P30260 824 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 SLC39A14Q15043 492 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 EPHA10Q5JZY3 1008 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 SHC4Q6S5L8 630 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 SYNE3Q6ZMZ3 975 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 METTL16Q86W50 562 aaKnown RBP14.65□□□□□ -0.06
CCDC60-201ENST00000327554 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
CCDC60-201ENST00000327554 CEP112Q8N8E3 955 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 FAM71BQ8TC56 605 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 GPHNQ9NQX3 736 aaPredicted RBP14.65□□□□□ -0.06
CCDC60-201ENST00000327554 USP54Q70EL1 1684 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 ADAMTS13Q76LX8 1427 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 LOC102724159A0A0B4J2E5 919 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 FAM237AA0A1B0GTK4 181 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 CPP00450 1065 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 IGKV5-2P06315 115 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 KIF23Q02241 960 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms