RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 OSBP2Q969R2 916 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 UTP14AQ9BVJ6 771 aaKnown RBP16.87■□□□□ 0.29
SSBP3-201ENST00000326956 FAM53CQ9NYF3 392 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 NCAPHQ15003 741 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 CPLX2Q6PUV4 134 aaKnown RBP16.86■□□□□ 0.29
SSBP3-201ENST00000326956 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 CALCOCO1Q9P1Z2 691 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 TPM1P09493 284 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 EVCP57679 992 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 CABP4P57796 275 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-201ENST00000326956 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-201ENST00000326956 FOXO4P98177 505 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 KIF23Q02241 960 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-201ENST00000326956 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 FBXL16Q8N461 479 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-201ENST00000326956 TIGD1Q96MW7 591 aa16.86■□□□□ 0.29
SSBP3-201ENST00000326956 ZNF213O14771 459 aa16.85■□□□□ 0.29
SSBP3-201ENST00000326956 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-201ENST00000326956 CASP7P55210 303 aa16.85■□□□□ 0.29
SSBP3-201ENST00000326956 SLC39A14Q15043 492 aa16.85■□□□□ 0.29
SSBP3-201ENST00000326956 AXDND1Q5T1B0 1012 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-201ENST00000326956 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
SSBP3-201ENST00000326956 KIF28PB7ZC32 967 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 H7C1W4 665 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 FGAP02671 866 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 PDE4CQ08493 712 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 PDILTQ8N807 584 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 CARD6Q9BX69 1037 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 TRIM29Q14134 588 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
SSBP3-201ENST00000326956 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-201ENST00000326956 CDKL5O76039 1030 aa16.83■□□□□ 0.29
SSBP3-201ENST00000326956 FHOD1Q9Y613 1164 aa16.83■□□□□ 0.29
SSBP3-201ENST00000326956 WDHD1O75717 1129 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-201ENST00000326956 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.28
SSBP3-201ENST00000326956 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.28
SSBP3-201ENST00000326956 ABCC6O95255 1503 aa16.83■□□□□ 0.28
SSBP3-201ENST00000326956 PNOCQ13519 176 aa16.83■□□□□ 0.28
SSBP3-201ENST00000326956 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
SSBP3-201ENST00000326956 CCDC102BQ68D86 513 aa16.83■□□□□ 0.28
SSBP3-201ENST00000326956 MB21D2Q8IYB1 491 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-201ENST00000326956 CNNM3Q8NE01 707 aa16.83■□□□□ 0.28
SSBP3-201ENST00000326956 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
SSBP3-201ENST00000326956 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
SSBP3-201ENST00000326956 PHRF1Q9P1Y6 1649 aaKnown RBP16.82■□□□□ 0.28
SSBP3-201ENST00000326956 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-201ENST00000326956 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 POLR3GO15318 223 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-201ENST00000326956 CASQ1P31415 396 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.281e-6■■■□□ 15.4
SSBP3-201ENST00000326956 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 DPF2Q92785 391 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 AKAP2Q9Y2D5 859 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 NEDD4P46934 1319 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 ARHGAP6O43182 974 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 VSTM4Q8IW00 320 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 TUBE1Q9UJT0 475 aa16.82■□□□□ 0.28
SSBP3-201ENST00000326956 GOLGA6L9A6NEM1 432 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSBP3-201ENST00000326956 APPBP2Q92624 585 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 C5P01031 1676 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 MYO1BO43795 1136 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 PPP6R2O75170 966 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 GNG11P61952 73 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 GOLGA8FQ08AF8 430 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 GOLGA8DPQ0D2H9 430 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 MPHOSPH8Q99549 860 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 PUS3Q9BZE2 481 aaKnown RBP16.81■□□□□ 0.28
SSBP3-201ENST00000326956 FANCLQ9NW38 375 aa16.81■□□□□ 0.28
SSBP3-201ENST00000326956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSBP3-201ENST00000326956 APPP05067 770 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 KRT40Q6A162 431 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 TADA3O75528 432 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 CIAO1O76071 339 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 PPP2R2CQ9Y2T4 447 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 ANTXR2P58335 489 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 HSP90AA4PQ58FG1 418 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
SSBP3-201ENST00000326956 BAG1Q99933 345 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-201ENST00000326956 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■□□□ 12.7
SSBP3-201ENST00000326956 ANGEL1Q9UNK9 670 aaKnown RBP16.8■□□□□ 0.28
SSBP3-201ENST00000326956 GPAA1O43292 621 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 PLA2G4AP47712 749 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 PTPN21Q16825 1174 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms