RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 LEO1Q8WVC0 666 aaPredicted RBP13.63□□□□□ -0.23
DDR1-223ENST00000324771 DHX58Q96C10 678 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 SRP68Q9UHB9 627 aaKnown RBP13.63□□□□□ -0.23
DDR1-223ENST00000324771 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
DDR1-223ENST00000324771 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 UFL1O94874 794 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 PDE8BO95263 885 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 LDHBP07195 334 aaKnown RBP13.63□□□□□ -0.23
DDR1-223ENST00000324771 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
DDR1-223ENST00000324771 ZNF76P36508 570 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
DDR1-223ENST00000324771 GJB4Q9NTQ9 266 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
DDR1-223ENST00000324771 PRKAB2O43741 272 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 CNNM2Q9H8M5 875 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 INCENPQ9NQS7 918 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 ATG3Q9NT62 314 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 USP17L12C9JPN9 530 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 USP17L21D6R901 530 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 UBA7P41226 1012 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 STAMQ92783 540 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 PTGS1P23219 599 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 CHRNDQ07001 517 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
DDR1-223ENST00000324771 MAST3O60307 1309 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 ZNF174Q15697 407 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
DDR1-223ENST00000324771 TM6SF1Q9BZW5 370 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 M0R2C6 588 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 CTAGE5O15320 804 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 TOP1P11387 765 aaKnown RBP13.61□□□□□ -0.23
DDR1-223ENST00000324771 KCNG4Q8TDN1 519 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 USP28Q96RU2 1077 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 LAMC1P11047 1609 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 SCRN1Q12765 414 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
DDR1-223ENST00000324771 KIF5BP33176 963 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 MCM7P33993 719 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 TTLL11Q8NHH1 800 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 UBA5Q9GZZ9 404 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 TNNT1P13805 278 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 EIF5P55010 431 aaKnown RBP13.6□□□□□ -0.23
DDR1-223ENST00000324771 STIM1Q13586 685 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 MED14O60244 1454 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 H7C1W4 665 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 RBM26Q5T8P6 1007 aaKnown RBP13.6□□□□□ -0.23
DDR1-223ENST00000324771 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
DDR1-223ENST00000324771 GPR101Q96P66 508 aaPredicted RBP13.6□□□□□ -0.23
DDR1-223ENST00000324771 DACH1Q9UI36 760 aa13.6□□□□□ -0.23
DDR1-223ENST00000324771 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
DDR1-223ENST00000324771 CYP2D7A0A087X1C5 515 aa13.59□□□□□ -0.23
DDR1-223ENST00000324771 KRT40Q6A162 431 aa13.59□□□□□ -0.23
DDR1-223ENST00000324771 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
DDR1-223ENST00000324771 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
DDR1-223ENST00000324771 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
DDR1-223ENST00000324771 TRIM75PA6NK02 468 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 NR1I2O75469 434 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 DNA2P51530 1060 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 SCARF1Q14162 830 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 ERFEQ4G0M1 354 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 TMTC2Q8N394 836 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 DSCC1Q9BVC3 393 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.23
DDR1-223ENST00000324771 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 TAF6LQ9Y6J9 622 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.23
DDR1-223ENST00000324771 NECTIN1Q15223 517 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 TEX11Q8IYF3 940 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 CEP89Q96ST8 783 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.241e-7■■■□□ 14.9
DDR1-223ENST00000324771 VWA3AA6NCI4 1184 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 ZSWIM4Q9H7M6 989 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDR1-223ENST00000324771 V9GYY5 206 aaPredicted RBP13.58□□□□□ -0.24
DDR1-223ENST00000324771 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 VWDEQ8N2E2 1590 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 TGFBRAP1Q8WUH2 860 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
DDR1-223ENST00000324771 DENND2AQ9ULE3 1009 aa13.58□□□□□ -0.24
DDR1-223ENST00000324771 CBFA2T2O43439 604 aa13.57□□□□□ -0.24
DDR1-223ENST00000324771 URI1O94763 535 aaPredicted RBP13.57□□□□□ -0.24
DDR1-223ENST00000324771 IL6STP40189 918 aaPredicted RBP13.57□□□□□ -0.24
DDR1-223ENST00000324771 NAPAP54920 295 aa13.57□□□□□ -0.24
DDR1-223ENST00000324771 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
DDR1-223ENST00000324771 TCP10Q12799 353 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms