RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PPIP5K1Q6PFW1 1433 aa23.67■■□□□ 1.38
RNF40-201ENST00000324685 SMIM23A6NLE4 172 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 VWA3BQ502W6 1294 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 CCDC122Q5T0U0 273 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 SEC62Q99442 399 aaKnown RBP23.66■■□□□ 1.38
RNF40-201ENST00000324685 PA2G4Q9UQ80 394 aaKnown RBP23.66■■□□□ 1.38
RNF40-201ENST00000324685 CCDC65Q8IXS2 484 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 OGFOD1Q8N543 542 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 CCDC110Q8TBZ0 833 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 MAGEB6Q8N7X4 407 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 TRIM7Q9C029 511 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.66■■□□□ 1.38
RNF40-201ENST00000324685 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
RNF40-201ENST00000324685 NUP160Q12769 1436 aa23.66■■□□□ 1.38
RNF40-201ENST00000324685 F8W031 263 aaPredicted RBP23.65■■□□□ 1.38
RNF40-201ENST00000324685 CADPS2Q86UW7 1296 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 DENND4BO75064 1496 aaPredicted RBP23.65■■□□□ 1.38
RNF40-201ENST00000324685 CFAP157Q5JU67 520 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 SV2BQ7L1I2 683 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 MCM9Q9NXL9 1143 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 FAM160A1Q05DH4 1040 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 UBLCP1Q8WVY7 318 aaPredicted RBP23.65■■□□□ 1.38
RNF40-201ENST00000324685 NIP7Q9Y221 180 aaKnown RBP eCLIP23.65■■□□□ 1.38
RNF40-201ENST00000324685 TLDC2A0PJX2 215 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 PLCD1P51178 756 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 LACTBP83111 547 aaPredicted RBP23.65■■□□□ 1.38
RNF40-201ENST00000324685 ERO1AQ96HE7 468 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 CSRNP2Q9H175 543 aa23.65■■□□□ 1.38
RNF40-201ENST00000324685 CCDC25Q86WR0 208 aa23.64■■□□□ 1.38
RNF40-201ENST00000324685 NKIRAS1Q9NYS0 192 aa23.64■■□□□ 1.38
RNF40-201ENST00000324685 CHMLP26374 656 aa23.64■■□□□ 1.38
RNF40-201ENST00000324685 MAP3K9P80192 1104 aa23.64■■□□□ 1.38
RNF40-201ENST00000324685 CHRNA2Q15822 529 aa23.64■■□□□ 1.38
RNF40-201ENST00000324685 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.64■■□□□ 1.38
RNF40-201ENST00000324685 SOS1Q07889 1333 aaPredicted RBP23.64■■□□□ 1.37
RNF40-201ENST00000324685 PPP2R3AQ06190 1150 aa23.64■■□□□ 1.37
RNF40-201ENST00000324685 GPR161Q8N6U8 529 aaKnown RBP23.64■■□□□ 1.37
RNF40-201ENST00000324685 ZMYND15Q9H091 742 aa23.64■■□□□ 1.37
RNF40-201ENST00000324685 TPD52P55327 224 aaPredicted RBP23.63■■□□□ 1.37
RNF40-201ENST00000324685 FRMD4BQ9Y2L6 1034 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 PPFIBP2Q8ND30 876 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 TTC16Q8NEE8 873 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 MAK16Q9BXY0 300 aaKnown RBP23.63■■□□□ 1.37
RNF40-201ENST00000324685 ANKRD2Q9GZV1 360 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 EPB41P11171 864 aaKnown RBP23.63■■□□□ 1.37
RNF40-201ENST00000324685 TFCP2Q12800 502 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 CHST3Q7LGC8 479 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 RAPGEF1Q13905 1077 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 KIFAP3Q92845 792 aa23.63■■□□□ 1.37
RNF40-201ENST00000324685 RSRC1Q96IZ7 334 aaKnown RBP23.63■■□□□ 1.37
RNF40-201ENST00000324685 INTS8Q75QN2 995 aaKnown RBP23.62■■□□□ 1.37
RNF40-201ENST00000324685 TTF2Q9UNY4 1162 aaKnown RBP23.62■■□□□ 1.37
RNF40-201ENST00000324685 TERF1P54274 439 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 SLC39A6Q13433 755 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 DPH6Q7L8W6 267 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 FAM212AQ96EL1 285 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 CTNND2Q9UQB3 1225 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 CIB2O75838 187 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 PLEKHM2Q8IWE5 1019 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 USP26Q9BXU7 913 aa23.62■■□□□ 1.37
RNF40-201ENST00000324685 NAPGQ99747 312 aaPredicted RBP23.62■■□□□ 1.37
RNF40-201ENST00000324685 EVCP57679 992 aa23.61■■□□□ 1.37
RNF40-201ENST00000324685 DNAJC21Q5F1R6 531 aaKnown RBP23.61■■□□□ 1.37
RNF40-201ENST00000324685 NOC4LQ9BVI4 516 aaKnown RBP23.61■■□□□ 1.37
RNF40-201ENST00000324685 ODF2LQ9ULJ1 636 aa23.61■■□□□ 1.37
RNF40-201ENST00000324685 PARP1P09874 1014 aaKnown RBP23.61■■□□□ 1.37
RNF40-201ENST00000324685 SNX16P57768 344 aa23.61■■□□□ 1.37
RNF40-201ENST00000324685 EIF4A2Q14240 407 aaKnown RBP23.61■■□□□ 1.37
RNF40-201ENST00000324685 DCAF17Q5H9S7 520 aaPredicted RBP23.61■■□□□ 1.37
RNF40-201ENST00000324685 RILPL1Q5EBL4 403 aa23.61■■□□□ 1.37
RNF40-201ENST00000324685 IFT74Q96LB3 600 aa23.61■■□□□ 1.37
RNF40-201ENST00000324685 CYP26C1Q6V0L0 522 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 B4GALNT4Q76KP1 1039 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 SWAP70Q9UH65 585 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 DZIP3Q86Y13 1208 aaKnown RBP23.6■■□□□ 1.37
RNF40-201ENST00000324685 MAP3K5Q99683 1374 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 INF2Q27J81 1249 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 MIGA1Q8NAN2 632 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 AFAP1L1Q8TED9 768 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 FANCAO15360 1455 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
RNF40-201ENST00000324685 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
RNF40-201ENST00000324685 GAS8O95995 478 aa23.59■■□□□ 1.37
RNF40-201ENST00000324685 CNNM4Q6P4Q7 775 aa23.59■■□□□ 1.37
RNF40-201ENST00000324685 STMN2Q93045 179 aa23.59■■□□□ 1.37
RNF40-201ENST00000324685 MKRN1Q9UHC7 482 aaKnown RBP23.59■■□□□ 1.37
RNF40-201ENST00000324685 ZWINTO95229 277 aa23.59■■□□□ 1.37
RNF40-201ENST00000324685 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.59■■□□□ 1.37
RNF40-201ENST00000324685 A6NNZ2 444 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 IRS4O14654 1257 aaPredicted RBP23.58■■□□□ 1.37
RNF40-201ENST00000324685 MTHFSDQ2M296 383 aaKnown RBP23.58■■□□□ 1.37
RNF40-201ENST00000324685 TUBB8Q3ZCM7 444 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 WDR44Q5JSH3 913 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 SMC1BQ8NDV3 1235 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 TNRQ92752 1358 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 VWA3AA6NCI4 1184 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 LDHBP07195 334 aaKnown RBP23.58■■□□□ 1.37
RNF40-201ENST00000324685 RPS6KB1P23443 525 aa23.58■■□□□ 1.37
RNF40-201ENST00000324685 CA8P35219 290 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms