RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 IGSF22Q8N9C0 903 aa8.88□□□□□ -0.99
CIITA-201ENST00000324288 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 CAVIN2O95810 425 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ABTB1Q969K4 478 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 PPANQ9NQ55 473 aaKnown RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 MTRF1LQ9UGC7 380 aaKnown RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 AKR1B15C9JRZ8 316 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 F13A1P00488 732 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 SMARCC2Q8TAQ2 1214 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 MCUR1Q96AQ8 359 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 NEDD9Q14511 834 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 NAPGQ99747 312 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 DDX21Q9NR30 783 aaKnown RBP eCLIP8.87□□□□□ -0.99
CIITA-201ENST00000324288 CHPF2Q9P2E5 772 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 KRT9P35527 623 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ALDH3A1P30838 453 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ARFGAP2Q8N6H7 521 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 MAK16Q9BXY0 300 aaKnown RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 GMNNO75496 209 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ZNF75DP51815 510 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 TAF12Q16514 161 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 MBIPQ9NS73 344 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ATAD2BQ9ULI0 1458 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 GOLGA6BA6NDN3 693 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 SATB1Q01826 763 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 RAPGEF1Q13905 1077 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 LRRC45Q96CN5 670 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 TTC19Q6DKK2 380 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 CCDC62Q6P9F0 684 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 POTEDQ86YR6 584 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ANKRD42Q8N9B4 389 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 RBM8AQ9Y5S9 174 aaKnown RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 EHBP1L1Q8N3D4 1523 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 CCDC172P0C7W6 258 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ST5P78524 1137 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 ZSCAN26Q16670 478 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 MIGA1Q8NAN2 632 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 KCNH5Q8NCM2 988 aa8.87□□□□□ -0.99
CIITA-201ENST00000324288 DBF4Q9UBU7 674 aaPredicted RBP8.87□□□□□ -0.99
CIITA-201ENST00000324288 MAPK8IP1Q9UQF2 711 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.99
CIITA-201ENST00000324288 MPHOSPH6Q99547 160 aaKnown RBP8.86□□□□□ -0.99
CIITA-201ENST00000324288 C16orf71Q8IYS4 520 aaPredicted RBP8.86□□□□□ -0.99
CIITA-201ENST00000324288 STAC3Q96MF2 364 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 PLVAPQ9BX97 442 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 E7EVH7 732 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 CHMP2AO43633 222 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 PRR16Q569H4 304 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 RPAINQ86UA6 219 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 CTAGE1Q96RT6 745 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 TXNDC16Q9P2K2 825 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 LRPPRCP42704 1394 aaKnown RBP8.86□□□□□ -0.99
CIITA-201ENST00000324288 WHAMMP3Q1A5X7 153 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 ZNF365Q70YC5 407 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 VPS52Q8N1B4 723 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 BCL2L12Q9HB09 334 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 PCDHB15Q9Y5E8 787 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 RPSAP08865 295 aaKnown RBP8.86□□□□□ -0.99
CIITA-201ENST00000324288 LMBR1Q8WVP7 490 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 MKRN1Q9UHC7 482 aaKnown RBP8.86□□□□□ -0.99
CIITA-201ENST00000324288 ALDH1L2Q3SY69 923 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 BAG1Q99933 345 aaPredicted RBP8.86□□□□□ -0.99
CIITA-201ENST00000324288 CCDC61Q9Y6R9 512 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 E2F5Q15329 346 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 IMPG2Q9BZV3 1241 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 PLEKHH2Q8IVE3 1493 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 VSIG1Q86XK7 387 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 ATP6V0A2Q9Y487 856 aa8.86□□□□□ -0.99
CIITA-201ENST00000324288 MYRIPQ8NFW9 859 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 TSPYL2Q9H2G4 693 aaPredicted RBP8.85□□□□□ -0.99
CIITA-201ENST00000324288 VCX3BQ9H321 246 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 PSMA7O14818 248 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 KRT83P78385 493 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 KCNG4Q8TDN1 519 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 TBC1D31Q96DN5 1066 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 SAP30BPQ9UHR5 308 aaKnown RBP8.85□□□□□ -0.99
CIITA-201ENST00000324288 HFM1A2PYH4 1435 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 CETN3O15182 167 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 SNX16P57768 344 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 PTPROQ16827 1216 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 GNGT1P63211 74 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 MAGEB6Q8N7X4 407 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 IGF1RP08069 1367 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 ATXN8OSP0DMR3 200 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 HHATQ5VTY9 493 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 DDX12PQ92771 950 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 DACT3Q96B18 629 aaPredicted RBP8.85□□□□□ -0.99
CIITA-201ENST00000324288 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 ATICP31939 592 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 MYCBPQ99417 103 aaPredicted RBP8.85□□□□□ -0.99
CIITA-201ENST00000324288 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 GABPAQ06546 454 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
CIITA-201ENST00000324288 TNNC1P63316 161 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 SLC39A6Q13433 755 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 AMOTQ4VCS5 1084 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms