RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PHLDB2Q86SQ0 1253 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 CNKSR2Q8WXI2 1034 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 SELENOSQ9BQE4 189 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 FAM204AQ9H8W3 233 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 MYOM1P52179 1685 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 INTS8Q75QN2 995 aaKnown RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 GBP5Q96PP8 586 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 BICDL2A1A5D9 508 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 CCDC151A5D8V7 595 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 PEX19P40855 299 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 FBXO38Q6PIJ6 1188 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 TRIM47Q96LD4 638 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 PRAM1Q96QH2 718 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 RIPOR2Q9Y4F9 1068 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 NOP2P46087 812 aaKnown RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 METAP2P50579 478 aaKnown RBP eCLIP7.94□□□□□ -1.149e-6■■■□□ 16
SMC1A-201ENST00000322213 TTC21BQ7Z4L5 1316 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 SMC6Q96SB8 1091 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 KDM5BQ9UGL1 1544 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 A2MP01023 1474 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 MBD5Q9P267 1494 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 MTMR3Q13615 1198 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 CCDC174Q6PII3 467 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 TADA2BQ86TJ2 420 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 NUP214P35658 2090 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 PSDA5PKW4 1024 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 IGSF22Q8N9C0 903 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 SREK1Q8WXA9 508 aaKnown RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 VCX3BQ9H321 246 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 CWC25Q9NXE8 425 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 PPP1R12AO14974 1030 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 AKR1B10O60218 316 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 GUCY2CP25092 1073 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 CLUL1Q15846 466 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 FAM210AQ96ND0 272 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 DESP17661 470 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 PRPF4BQ13523 1007 aaKnown RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 GKAP1Q5VSY0 366 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 Q6ZUG5 572 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 NECAB1Q8N987 351 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 KIAA1524Q8TCG1 905 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 LEO1Q8WVC0 666 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 LMBR1Q8WVP7 490 aa7.94□□□□□ -1.14
SMC1A-201ENST00000322213 SEC63Q9UGP8 760 aaKnown RBP7.94□□□□□ -1.14
SMC1A-201ENST00000322213 SLMAPQ14BN4 828 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CROCCP2Q86T23 111 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 NOL3O60936 208 aaKnown RBP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CHMLP26374 656 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 STAT6P42226 847 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CLCN6P51797 869 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 BOLA2Q9H3K6 86 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CIB2O75838 187 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 PAK2Q13177 524 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 TSKSQ9UJT2 592 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 FYB1O15117 783 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 GIGYF1O75420 1035 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 FANCCQ00597 558 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 PPFIBP2Q8ND30 876 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CASZ1Q86V15 1759 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 HNRNPH2P55795 449 aaKnown RBP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 FLIIQ13045 1269 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 ARMC9Q7Z3E5 817 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 RASEFQ8IZ41 740 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CCDC42Q96M95 316 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 AKAP2Q9Y2D5 859 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CCDC40Q4G0X9 1142 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CCDC26Q8TAB7 109 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 BRF1Q92994 677 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 AIDAQ96BJ3 306 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 TTC3P53804 2025 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 SEPT2Q15019 361 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 MUM1Q2TAK8 710 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 NBPF20Q3BBV1 942 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 MTRF1LQ9UGC7 380 aaKnown RBP7.93□□□□□ -1.14
SMC1A-201ENST00000322213 NR1I2O75469 434 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 ZBTB16Q05516 673 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 CEP85Q6P2H3 762 aa7.93□□□□□ -1.14
SMC1A-201ENST00000322213 NBPF7P0C2Y1 421 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-201ENST00000322213 HSP90AA4PQ58FG1 418 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 SEC62Q99442 399 aaKnown RBP7.92□□□□□ -1.14
SMC1A-201ENST00000322213 ZNF692Q9BU19 519 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-201ENST00000322213 LRRD1A4D1F6 860 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 SMIM24O75264 130 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 PPFIA4O75335 1185 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 TMEM266Q2M3C6 531 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 DENND2CQ68D51 928 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 TMTC1Q8IUR5 882 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 PSMA7O14818 248 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 ZBTB17Q13105 803 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 RBM8AQ9Y5S9 174 aaKnown RBP7.92□□□□□ -1.14
SMC1A-201ENST00000322213 FCHSD1Q86WN1 690 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 ARHGAP24Q8N264 748 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 FBXO18Q8NFZ0 1043 aa7.92□□□□□ -1.14
SMC1A-201ENST00000322213 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
SMC1A-201ENST00000322213 BAZ2AQ9UIF9 1905 aaKnown RBP7.92□□□□□ -1.14
SMC1A-201ENST00000322213 FYB2Q5VWT5 728 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms