RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PUF60Q9UHX1 559 aaKnown RBP11.14□□□□□ -0.63
PTPRA-202ENST00000318266 ADAM21Q9UKJ8 722 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 TRPC5Q9UL62 973 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-202ENST00000318266 FAM193AP78312 1265 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 TNNI3KQ59H18 835 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 WWC2Q6AWC2 1192 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 TOGARAM2Q6ZUX3 1019 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 DHX58Q96C10 678 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 BABAM1Q9NWV8 329 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 RTEL1Q9NZ71 1219 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 FPGT-TNNI3KV9GXZ4 949 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 NEDD4P46934 1319 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 E7EWF7 191 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 PHACTR2O75167 634 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 MYD88Q99836 296 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 HSD3B7Q9H2F3 369 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 VPS18Q9P253 973 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 BRINP3Q76B58 766 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 TSPYL1Q9H0U9 437 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 CCP110O43303 1012 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
PTPRA-202ENST00000318266 CCDC12Q8WUD4 166 aaPredicted RBP11.13□□□□□ -0.63
PTPRA-202ENST00000318266 AIFM3Q96NN9 605 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 SRRTQ9BXP5 876 aaKnown RBP11.13□□□□□ -0.63
PTPRA-202ENST00000318266 SUGCTQ9HAC7 445 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 LZTFL1Q9NQ48 299 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 ZSCAN12O43309 604 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
PTPRA-202ENST00000318266 ATP5JP18859 108 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 SLC39A6Q13433 755 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 LONRF2Q1L5Z9 754 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 SPECC1Q5M775 1068 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 KCNG4Q8TDN1 519 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 AK7Q96M32 723 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
PTPRA-202ENST00000318266 CPLX1O14810 134 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 SYKP43405 635 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 MYL5Q02045 173 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 MTF1Q14872 753 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 UBE3BQ7Z3V4 1068 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-202ENST00000318266 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
PTPRA-202ENST00000318266 SIRT1Q96EB6 747 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 CLIC6Q96NY7 704 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 BAG1Q99933 345 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-202ENST00000318266 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 A0A1W2PQ27 194 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 A0A1W2PQ64 194 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 A0A1W2PQD8 194 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
PTPRA-202ENST00000318266 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 PLEKHA4Q9H4M7 779 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 CEMIPQ8WUJ3 1361 aa11.12□□□□□ -0.63
PTPRA-202ENST00000318266 A0A0U1RQJ8 604 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 ATP5J2-PTCD1G3V325 749 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 TPM1P09493 284 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 HOXB7P09629 217 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 RXRAP19793 462 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 NEXNQ0ZGT2 675 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 KCNJ6P48051 423 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 TIMM10P62072 90 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 PSME1Q06323 249 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 ZNF827Q17R98 1081 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 MUM1L1Q5H9M0 696 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 ANO1Q5XXA6 986 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 ATL3Q6DD88 541 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 VSTM4Q8IW00 320 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 BPIFA3Q9BQP9 254 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 RRP15Q9Y3B9 282 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 MRFAP1Q9Y605 127 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 FOXN1O15353 648 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 UBXN6Q9BZV1 441 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 INTS13Q9NVM9 706 aa11.11□□□□□ -0.63
PTPRA-202ENST00000318266 CWC15Q9P013 229 aaKnown RBP11.11□□□□□ -0.63
PTPRA-202ENST00000318266 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 TECPR2O15040 1411 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 ARHGAP6O43182 974 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 CBFA2T2O43439 604 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
PTPRA-202ENST00000318266 CDC27P30260 824 aa11.1□□□□□ -0.63
PTPRA-202ENST00000318266 XAGE3Q8WTP9 111 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms