RNA–Protein interactions for RNA: ENST00000318249.9

NBPF3-202, Transcript of NBPF member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBPF3, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-202ENST00000318249 ARMC2Q8NEN0 867 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 ARHGAP45Q92619 1136 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 SPATS2LQ9NUQ6 558 aaKnown RBP8.48□□□□□ -1.05
NBPF3-202ENST00000318249 SLIT2O94813 1529 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 PNMA6EA0A0J9YXQ4 647 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 GNPATO15228 680 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 TBC1D8O95759 1140 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 SNRPA1P09661 255 aaKnown RBP8.48□□□□□ -1.05
NBPF3-202ENST00000318249 TBC1D25Q3MII6 688 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 CCDC93Q567U6 631 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.48□□□□□ -1.05
NBPF3-202ENST00000318249 KAT2BQ92831 832 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 DDX58O95786 925 aaKnown RBP8.48□□□□□ -1.05
NBPF3-202ENST00000318249 TTLL5Q6EMB2 1281 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 CWC27Q6UX04 472 aaKnown RBP8.48□□□□□ -1.05
NBPF3-202ENST00000318249 BICDL1Q6ZP65 573 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 DNAJC10Q8IXB1 793 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 CTCFLQ8NI51 663 aaPredicted RBP8.48□□□□□ -1.05
NBPF3-202ENST00000318249 KLHDC4Q8TBB5 520 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 CLIP2Q9UDT6 1046 aa8.48□□□□□ -1.05
NBPF3-202ENST00000318249 MARF1Q9Y4F3 1742 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 BRD1O95696 1058 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 ABCD1P33897 745 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 LRMPQ12912 555 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 MICALL1Q8N3F8 863 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 DRAXINQ8NBI3 349 aaPredicted RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 THOC1Q96FV9 657 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 BAG1Q99933 345 aaPredicted RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 ZNF219Q9P2Y4 722 aaPredicted RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 PA2G4Q9UQ80 394 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 CCP110O43303 1012 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 HMMRO75330 724 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 ERLIN2O94905 339 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 CASTP20810 708 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 CCNHP51946 323 aaPredicted RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 ARHGAP29Q52LW3 1261 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 CEP85Q6P2H3 762 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 RILPL2Q969X0 211 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 UTP14AQ9BVJ6 771 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 ORC3Q9UBD5 711 aaPredicted RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 SETSIPP0DME0 302 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 RBBP5Q15291 538 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 SF3A1Q15459 793 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 CPLX2Q6PUV4 134 aaKnown RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 TTLL7Q6ZT98 887 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 UBE3BQ7Z3V4 1068 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 TMEM87AQ8NBN3 555 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 PIGBQ92521 554 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 TMX4Q9H1E5 349 aaPredicted RBP8.47□□□□□ -1.05
NBPF3-202ENST00000318249 SLIT3O75094 1523 aa8.47□□□□□ -1.05
NBPF3-202ENST00000318249 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.05
NBPF3-202ENST00000318249 SASH3O75995 380 aa8.46□□□□□ -1.05
NBPF3-202ENST00000318249 RFC4P35249 363 aa8.46□□□□□ -1.05
NBPF3-202ENST00000318249 SCRN1Q12765 414 aa8.46□□□□□ -1.05
NBPF3-202ENST00000318249 INTS3Q68E01 1043 aaKnown RBP8.46□□□□□ -1.05
NBPF3-202ENST00000318249 PPP1R42Q7Z4L9 355 aa8.46□□□□□ -1.05
NBPF3-202ENST00000318249 TBC1D2BQ9UPU7 963 aa8.46□□□□□ -1.05
NBPF3-202ENST00000318249 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.05
NBPF3-202ENST00000318249 COL5A2P05997 1499 aaPredicted RBP8.46□□□□□ -1.05
NBPF3-202ENST00000318249 NEMFO60524 1076 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 SNUPNO95149 360 aaKnown RBP8.46□□□□□ -1.06
NBPF3-202ENST00000318249 GNAI3P08754 354 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 SMARCC1Q92922 1105 aaPredicted RBP8.46□□□□□ -1.06
NBPF3-202ENST00000318249 MTFR1LQ9H019 292 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 KCNA4P22459 653 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 PREPLQ4J6C6 727 aaPredicted RBP8.46□□□□□ -1.06
NBPF3-202ENST00000318249 ZGPATQ8N5A5 531 aaKnown RBP8.46□□□□□ -1.06
NBPF3-202ENST00000318249 N4BP2L2Q92802 583 aaPredicted RBP8.46□□□□□ -1.06
NBPF3-202ENST00000318249 CHAMP1Q96JM3 812 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 USP26Q9BXU7 913 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 USP44Q9H0E7 712 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 BCS1LQ9Y276 419 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 PCDHGA4Q9Y5G9 962 aa8.46□□□□□ -1.06
NBPF3-202ENST00000318249 PPFIA4O75335 1185 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 MSL3Q8N5Y2 521 aaKnown RBP8.45□□□□□ -1.06
NBPF3-202ENST00000318249 MICAL1Q8TDZ2 1067 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 JPH2Q9BR39 696 aaPredicted RBP8.45□□□□□ -1.06
NBPF3-202ENST00000318249 PLSCR1O15162 318 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 NF2P35240 595 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 PRPHP41219 470 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 PSMD2Q13200 908 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 HSP90AB4PQ58FF6 505 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 CCDC97Q96F63 343 aaPredicted RBP8.45□□□□□ -1.06
NBPF3-202ENST00000318249 DDX11Q96FC9 970 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 DDX21Q9NR30 783 aaKnown RBP eCLIP8.45□□□□□ -1.06
NBPF3-202ENST00000318249 HYPKQ9NX55 129 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 RGPD1P0DJD0 1748 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 TUBB4AP04350 444 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 PDIA5Q14554 519 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 CC2D1AQ6P1N0 951 aaPredicted RBP8.45□□□□□ -1.06
NBPF3-202ENST00000318249 TMX3Q96JJ7 454 aa8.45□□□□□ -1.06
NBPF3-202ENST00000318249 MMTAG2Q9BU76 263 aaKnown RBP8.45□□□□□ -1.06
NBPF3-202ENST00000318249 CHCHD3Q9NX63 227 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms