RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.38■□□□□ 0.05
RFFL-201ENST00000315249 BABAM1Q9NWV8 329 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 TMCO5BA8MYB1 307 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 HARSP12081 509 aaKnown RBP15.38■□□□□ 0.05
RFFL-201ENST00000315249 GSTTP1A0A1W2PQM5 241 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 ZBED4O75132 1171 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 UIMC1Q96RL1 719 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 RBM27Q9P2N5 1060 aaKnown RBP15.38■□□□□ 0.05
RFFL-201ENST00000315249 PLEKHG1Q9ULL1 1385 aa15.38■□□□□ 0.05
RFFL-201ENST00000315249 SLC1A4P43007 532 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 TBC1D5Q92609 795 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 GPAA1O43292 621 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 YEATS4O95619 227 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 BMP15O95972 392 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 CCDC112Q8NEF3 446 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 DDX39AO00148 427 aaKnown RBP15.37■□□□□ 0.05
RFFL-201ENST00000315249 LETM2Q2VYF4 491 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 LRSAM1Q6UWE0 723 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 TBC1D22AQ8WUA7 517 aa15.37■□□□□ 0.05
RFFL-201ENST00000315249 DHX58Q96C10 678 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
RFFL-201ENST00000315249 RMND1Q9NWS8 449 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 USO1O60763 962 aaKnown RBP15.36■□□□□ 0.05
RFFL-201ENST00000315249 HOXB7P09629 217 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 CNGA1P29973 690 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 DTHD1Q6ZMT9 781 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 HELLSQ9NRZ9 838 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 TNFAIP1Q13829 316 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 DDX19AQ9NUU7 478 aaKnown RBP15.36■□□□□ 0.05
RFFL-201ENST00000315249 MRVI1Q9Y6F6 885 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 TTC37Q6PGP7 1564 aa15.36■□□□□ 0.05
RFFL-201ENST00000315249 NSMFQ6X4W1 530 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 CHL1O00533 1208 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 GYG1P46976 350 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 DHX32Q7L7V1 743 aaKnown RBP15.35■□□□□ 0.05
RFFL-201ENST00000315249 RGS22Q8NE09 1264 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 NEURL1BA8MQ27 555 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 KIF22Q14807 665 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 STX1AQ16623 288 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 KDM5CP41229 1560 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 ZAP70P43403 619 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 CTDSPL2Q05D32 466 aa15.35■□□□□ 0.05
RFFL-201ENST00000315249 KIF5CO60282 957 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 SAMD9LQ8IVG5 1584 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 HOOK3Q86VS8 718 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 ATP2B4P23634 1241 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 ADGRL2O95490 1459 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 KCNG4Q8TDN1 519 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 APPBP2Q92624 585 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 GIGYF1O75420 1035 aaPredicted RBP15.34■□□□□ 0.05
RFFL-201ENST00000315249 ZNF532Q9HCE3 1301 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 PPEF1O14829 653 aaPredicted RBP15.34■□□□□ 0.05
RFFL-201ENST00000315249 LMAN1P49257 510 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 MAEAQ7L5Y9 396 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 IL17REQ8NFR9 667 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
RFFL-201ENST00000315249 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
RFFL-201ENST00000315249 N4BP3O15049 544 aa15.33■□□□□ 0.05
RFFL-201ENST00000315249 DNAJC5Q9H3Z4 198 aa15.33■□□□□ 0.05
RFFL-201ENST00000315249 CCNT1O60563 726 aaKnown RBP15.33■□□□□ 0.04
RFFL-201ENST00000315249 LUZP1Q86V48 1076 aa15.33■□□□□ 0.04
RFFL-201ENST00000315249 TRIM6Q9C030 488 aaPredicted RBP15.33■□□□□ 0.04
RFFL-201ENST00000315249 SPOUT1Q5T280 376 aaKnown RBP15.33■□□□□ 0.04
RFFL-201ENST00000315249 ZBTB38Q8NAP3 1195 aaPredicted RBP15.33■□□□□ 0.04
RFFL-201ENST00000315249 AFF2P51816 1311 aa15.33■□□□□ 0.04
RFFL-201ENST00000315249 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.04
RFFL-201ENST00000315249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
RFFL-201ENST00000315249 ZSCAN22P10073 491 aaPredicted RBP15.33■□□□□ 0.04
RFFL-201ENST00000315249 KIF4BQ2VIQ3 1234 aa15.33■□□□□ 0.04
RFFL-201ENST00000315249 TMC6Q7Z403 805 aa15.33■□□□□ 0.04
RFFL-201ENST00000315249 SERPINB2P05120 415 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 CFBP00751 764 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 FAM47CQ5HY64 1035 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 CCDC169A6NNP5 214 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 SPAG5Q96R06 1193 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 CASQ1P31415 396 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 ARID5AQ03989 594 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 FERMT1Q9BQL6 677 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 EP400NLQ6ZTU2 488 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 MAP7D2Q96T17 732 aa15.32■□□□□ 0.04
RFFL-201ENST00000315249 HS2ST1Q7LGA3 356 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 DHX37Q8IY37 1157 aaKnown RBP15.31■□□□□ 0.04
RFFL-201ENST00000315249 ABCA8O94911 1581 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 H0YHG0 523 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 BCAMP50895 628 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 ZNF174Q15697 407 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 CLRN2A0PK11 232 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms