RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 ZMYM1Q5SVZ6 1142 aa21.14■□□□□ 0.97
CDK5R1-201ENST00000313401 KARSQ15046 597 aaKnown RBP21.14■□□□□ 0.97
CDK5R1-201ENST00000313401 KIF2AO00139 706 aaPredicted RBP21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 MAPK8IP2Q13387 824 aaPredicted RBP21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 DPCR1Q3MIW9 517 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 STOX1Q6ZVD7 989 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 PUS7LQ9H0K6 701 aaKnown RBP21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 TXLNAP40222 546 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 TCIRG1Q13488 830 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 BRAPQ7Z569 592 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 IQCA1Q86XH1 822 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 CCDC150Q8NCX0 1101 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 TEX13AQ9BXU3 409 aaPredicted RBP21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 PNOCQ13519 176 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 ELF2Q15723 593 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 STAMQ92783 540 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 ELP1O95163 1332 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 ATP2B2Q01814 1243 aa21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 TRMT44Q8IYL2 757 aaKnown RBP21.13■□□□□ 0.97
CDK5R1-201ENST00000313401 UQCRFS1P1P0C7P4 283 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 GOLGA8FQ08AF8 430 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 GOLGA8DPQ0D2H9 430 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 ZNF827Q17R98 1081 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 GREM2Q9H772 168 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 CABP5Q9NP86 173 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 RNF216Q9NWF9 866 aaPredicted RBP21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 ZSCAN12O43309 604 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 SLU7O95391 586 aaKnown RBP21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 NLRP5P59047 1200 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 BTG4Q9NY30 223 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 KIAA1468Q9P260 1216 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 NIP7Q9Y221 180 aaKnown RBP eCLIP21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 PFKFB1P16118 471 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 FANCCQ00597 558 aa21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 CTCFLQ8NI51 663 aaPredicted RBP21.12■□□□□ 0.97
CDK5R1-201ENST00000313401 GPS2Q13227 327 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 KIF4BQ2VIQ3 1234 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 CASQ1P31415 396 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 CAVIN4Q5BKX8 364 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 CCDC24Q8N4L8 307 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 CAGE1Q8TC20 777 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 CCDC47Q96A33 483 aaKnown RBP21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 INCENPQ9NQS7 918 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 CEP131Q9UPN4 1083 aa21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 ZNF215Q9UL58 517 aaPredicted RBP21.11■□□□□ 0.97
CDK5R1-201ENST00000313401 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 LRRC8AQ8IWT6 810 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 ZNF274Q96GC6 653 aaPredicted RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 CATIPQ7Z7H3 387 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 DIS3L2Q8IYB7 885 aaKnown RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 POLR2DO15514 142 aaKnown RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 PHKA1P46020 1223 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 FBXO18Q8NFZ0 1043 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 CCDC12Q8WUD4 166 aaPredicted RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 IFT172Q9UG01 1749 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 TDRD7Q8NHU6 1098 aaKnown RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 RNF41Q9H4P4 317 aaPredicted RBP21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 KCNH3Q9ULD8 1083 aa21.1■□□□□ 0.97
CDK5R1-201ENST00000313401 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
CDK5R1-201ENST00000313401 CLSTN1O94985 981 aa21.09■□□□□ 0.97
CDK5R1-201ENST00000313401 MYL5Q02045 173 aa21.09■□□□□ 0.97
CDK5R1-201ENST00000313401 GOLPH3LQ9H4A5 285 aa21.09■□□□□ 0.97
CDK5R1-201ENST00000313401 LZTFL1Q9NQ48 299 aa21.09■□□□□ 0.97
CDK5R1-201ENST00000313401 CARMIL3Q8ND23 1372 aa21.08■□□□□ 0.97
CDK5R1-201ENST00000313401 CCDC144BQ3MJ40 725 aa21.08■□□□□ 0.97
CDK5R1-201ENST00000313401 RCOR1Q9UKL0 485 aa21.08■□□□□ 0.97
CDK5R1-201ENST00000313401 HSP90B2PQ58FF3 399 aa21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 KCNF1Q9H3M0 494 aa21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 MAGEC2Q9UBF1 373 aaPredicted RBP21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 NBPF26B4DH59 902 aa21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 PDIA6Q15084 440 aa21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 NBPF14Q5TI25 921 aa21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 NBPF10Q6P3W6 841 aaKnown RBP21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 NBPF15Q8N660 670 aa21.08■□□□□ 0.96
CDK5R1-201ENST00000313401 TSPY2A6NKD2 308 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 PLIN2Q99541 437 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 NUP88Q99567 741 aaPredicted RBP21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 VAT1LQ9HCJ6 419 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 MAPK8IP1Q9UQF2 711 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 AP5Z1O43299 807 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 KRI1Q8N9T8 703 aaKnown RBP21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 KRT23Q9C075 422 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 MKNK2Q9HBH9 465 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 BTBD18B2RXH4 712 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 USP5P45974 858 aa21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 IFIT1BQ5T764 474 aaKnown RBP21.07■□□□□ 0.96
CDK5R1-201ENST00000313401 SSBP05455 408 aaKnown RBP eCLIP21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 SCARF1Q14162 830 aa21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 ST3GAL1Q11201 340 aa21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 ATL3Q6DD88 541 aa21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 ZNF174Q15697 407 aa21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 TECPR2O15040 1411 aa21.06■□□□□ 0.96
CDK5R1-201ENST00000313401 N4BP3O15049 544 aa21.05■□□□□ 0.96
CDK5R1-201ENST00000313401 PDE6AP16499 860 aa21.05■□□□□ 0.96
CDK5R1-201ENST00000313401 EIF5P55010 431 aaKnown RBP21.05■□□□□ 0.96
CDK5R1-201ENST00000313401 TMEM94Q12767 1356 aa21.05■□□□□ 0.96
CDK5R1-201ENST00000313401 PIP4K2BP78356 416 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms