RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TCHPQ9BT92 498 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 GUCA1BQ9UMX6 200 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 MAP3K2Q9Y2U5 619 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
HCFC1-201ENST00000310441 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
HCFC1-201ENST00000310441 VAT1LQ9HCJ6 419 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 TYRO3Q06418 890 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 CNNM4Q6P4Q7 775 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 PPP2R5EQ16537 467 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 SPATS2Q86XZ4 545 aaKnown RBP17.34■□□□□ 0.37
HCFC1-201ENST00000310441 TTF2Q9UNY4 1162 aaKnown RBP17.34■□□□□ 0.37
HCFC1-201ENST00000310441 ELP1O95163 1332 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 Q9H521 79 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 FAM204AQ9H8W3 233 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.37
HCFC1-201ENST00000310441 CCDC170Q8IYT3 715 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 NOX5Q96PH1 765 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 PARP2Q9UGN5 583 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 TTC41PQ6P2S7 1318 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 KLF18A0A0U1RQI7 1052 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 MUM1L1Q5H9M0 696 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 NUP58Q9BVL2 599 aa17.33■□□□□ 0.37
HCFC1-201ENST00000310441 AKR1B15C9JRZ8 316 aaPredicted RBP17.33■□□□□ 0.36
HCFC1-201ENST00000310441 TRIM27P14373 513 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
HCFC1-201ENST00000310441 SYNJ1O43426 1573 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 TMEM110-MUSTN1A8MSY1 372 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 SNX21Q969T3 373 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 ZNF830Q96NB3 372 aaPredicted RBP17.33■□□□□ 0.36
HCFC1-201ENST00000310441 NAIPQ13075 1403 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 RNF10Q8N5U6 811 aaKnown RBP17.33■□□□□ 0.36
HCFC1-201ENST00000310441 GSDMBQ8TAX9 411 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 NUCB1Q02818 461 aa17.33■□□□□ 0.36
HCFC1-201ENST00000310441 DNAJC8O75937 253 aaPredicted RBP17.32■□□□□ 0.36
HCFC1-201ENST00000310441 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
HCFC1-201ENST00000310441 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
HCFC1-201ENST00000310441 NCOA1Q15788 1441 aa17.32■□□□□ 0.36
HCFC1-201ENST00000310441 RFC1P35251 1148 aaPredicted RBP17.32■□□□□ 0.36
HCFC1-201ENST00000310441 PRR16Q569H4 304 aa17.32■□□□□ 0.36
HCFC1-201ENST00000310441 ARID5AQ03989 594 aa17.32■□□□□ 0.36
HCFC1-201ENST00000310441 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
HCFC1-201ENST00000310441 ZNF365Q70YC5 407 aa17.32■□□□□ 0.36
HCFC1-201ENST00000310441 RNF216Q9NWF9 866 aaPredicted RBP17.32■□□□□ 0.36
HCFC1-201ENST00000310441 PAXIP1Q6ZW49 1069 aaPredicted RBP17.31■□□□□ 0.36
HCFC1-201ENST00000310441 INTS4Q96HW7 963 aaKnown RBP17.31■□□□□ 0.36
HCFC1-201ENST00000310441 PLCD1P51178 756 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 CCDC122Q5T0U0 273 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 KIF11P52732 1056 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 BAG1Q99933 345 aaPredicted RBP17.31■□□□□ 0.36
HCFC1-201ENST00000310441 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 ISM2Q6H9L7 571 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 SH2D4AQ9H788 454 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 CALUO43852 315 aaPredicted RBP17.31■□□□□ 0.36
HCFC1-201ENST00000310441 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 GOLGA8QA0A0J9YX86 632 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 GOLGA8OA6NCC3 632 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 GOLGA8NF8WBI6 632 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 INPP5BP32019 993 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 WHAMMP3Q1A5X7 153 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 UBE3BQ7Z3V4 1068 aa17.31■□□□□ 0.36
HCFC1-201ENST00000310441 RPGRIP1Q96KN7 1286 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 NDUFAB1O14561 156 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 PANK2Q9BZ23 570 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 IMPACTQ9P2X3 320 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 EXOC7Q9UPT5 735 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 THEGQ9P2T0 379 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 F13A1P00488 732 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 ZNF569Q5MCW4 686 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 USP48Q86UV5 1035 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 NUCKS1Q9H1E3 243 aaKnown RBP17.3■□□□□ 0.36
HCFC1-201ENST00000310441 NAPGQ99747 312 aaPredicted RBP17.3■□□□□ 0.36
HCFC1-201ENST00000310441 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 PPP2R3AQ06190 1150 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 HAUS3Q68CZ6 603 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 ERO1AQ96HE7 468 aa17.3■□□□□ 0.36
HCFC1-201ENST00000310441 DKC1O60832 514 aaKnown RBP eCLIP17.29■□□□□ 0.36
HCFC1-201ENST00000310441 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 P3H4Q92791 437 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 KCNG1Q9UIX4 513 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
HCFC1-201ENST00000310441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.29■□□□□ 0.36
HCFC1-201ENST00000310441 LUC7L3O95232 432 aaKnown RBP17.29■□□□□ 0.36
HCFC1-201ENST00000310441 ARHGEF2Q92974 986 aaKnown RBP17.29■□□□□ 0.36
HCFC1-201ENST00000310441 PPANQ9NQ55 473 aaKnown RBP17.29■□□□□ 0.36
HCFC1-201ENST00000310441 CCDC89Q8N998 374 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 NSMCE1Q8WV22 266 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 PPP4R1Q8TF05 950 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 ZKSCAN3Q9BRR0 538 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms