RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 UQCRHLA0A096LP55 91 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 UQCRHP07919 91 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 SIK1P57059 783 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 BECN2A8MW95 431 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPN2-201ENST00000309660 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 LRP2BPQ9P2M1 347 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 PTGS1P23219 599 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
PTPN2-201ENST00000309660 TDO2P48775 406 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
PTPN2-201ENST00000309660 ZRSR1Q15695 479 aaKnown RBP13.48□□□□□ -0.25
PTPN2-201ENST00000309660 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 KCNQ2O43526 872 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 PRKAB2O43741 272 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 NOLC1Q14978 699 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN2-201ENST00000309660 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
PTPN2-201ENST00000309660 RCOR1Q9UKL0 485 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
PTPN2-201ENST00000309660 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 MARCKSP29966 332 aaPredicted RBP13.47□□□□□ -0.25
PTPN2-201ENST00000309660 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 TPM2P07951 284 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 ITPK1Q13572 414 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 HSP90AA2PQ14568 343 aaPredicted RBP13.47□□□□□ -0.25
PTPN2-201ENST00000309660 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
PTPN2-201ENST00000309660 BIN1O00499 593 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
PTPN2-201ENST00000309660 C11orf57Q6ZUT1 292 aaPredicted RBP13.46□□□□□ -0.25
PTPN2-201ENST00000309660 CCDC186Q7Z3E2 898 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 ALG1Q9BT22 464 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 STRCQ7RTU9 1775 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 NEDD4P46934 1319 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 SALL1Q9NSC2 1324 aa13.46□□□□□ -0.25
PTPN2-201ENST00000309660 IFIT3O14879 490 aaKnown RBP13.46□□□□□ -0.26
PTPN2-201ENST00000309660 ISM2Q6H9L7 571 aa13.46□□□□□ -0.26
PTPN2-201ENST00000309660 INTS5Q6P9B9 1019 aaKnown RBP13.46□□□□□ -0.26
PTPN2-201ENST00000309660 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.26
PTPN2-201ENST00000309660 PYCARDQ9ULZ3 195 aa13.46□□□□□ -0.26
PTPN2-201ENST00000309660 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.26
PTPN2-201ENST00000309660 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
PTPN2-201ENST00000309660 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
PTPN2-201ENST00000309660 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
PTPN2-201ENST00000309660 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 MINDY4BA8MYZ0 360 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 STRBPQ96SI9 672 aaKnown RBP13.45□□□□□ -0.26
PTPN2-201ENST00000309660 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 KIF28PB7ZC32 967 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 ZBTB43O43298 467 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 FAM160A1Q05DH4 1040 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 LRMPQ12912 555 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 IFNL3Q8IZI9 196 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
PTPN2-201ENST00000309660 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 MRPS27Q92552 414 aaKnown RBP13.45□□□□□ -0.26
PTPN2-201ENST00000309660 RAI14Q9P0K7 980 aa13.45□□□□□ -0.26
PTPN2-201ENST00000309660 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 NDUFA8P51970 172 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 MYSM1Q5VVJ2 828 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 SPTLC2O15270 562 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
PTPN2-201ENST00000309660 CDC27P30260 824 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 GYG1P46976 350 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 EPB41L4AQ9HCS5 686 aaPredicted RBP13.44□□□□□ -0.26
PTPN2-201ENST00000309660 SLC12A7Q9Y666 1083 aa13.44□□□□□ -0.26
PTPN2-201ENST00000309660 CHRNDQ07001 517 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 TRIM29Q14134 588 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 NPHP1O15259 732 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
PTPN2-201ENST00000309660 SNW1Q13573 536 aaKnown RBP13.43□□□□□ -0.26
PTPN2-201ENST00000309660 STX1AQ16623 288 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 LINC00301Q8NCQ3 95 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 TSC1Q92574 1164 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms