RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 ZBTB38Q8NAP3 1195 aaPredicted RBP24.28■■□□□ 1.48
RELA-201ENST00000308639 HELBQ8NG08 1087 aaPredicted RBP24.28■■□□□ 1.48
RELA-201ENST00000308639 CCDC94Q9BW85 323 aaPredicted RBP24.28■■□□□ 1.48
RELA-201ENST00000308639 NEDD4P46934 1319 aa24.28■■□□□ 1.48
RELA-201ENST00000308639 SNAP23O00161 211 aa24.28■■□□□ 1.48
RELA-201ENST00000308639 CSF1RP07333 972 aa24.28■■□□□ 1.48
RELA-201ENST00000308639 ZFYP08048 801 aaPredicted RBP24.28■■□□□ 1.48
RELA-201ENST00000308639 RIPOR2Q9Y4F9 1068 aa24.28■■□□□ 1.48
RELA-201ENST00000308639 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 SHANK3Q9BYB0 1731 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 SPEF2Q9C093 1822 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 CEP57L1Q8IYX8 460 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 CARD10Q9BWT7 1032 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 TRMT1Q9NXH9 659 aaKnown RBP24.27■■□□□ 1.48
RELA-201ENST00000308639 PLEKHG2Q9H7P9 1386 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 TOGARAM1Q9Y4F4 1720 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 CAVIN2O95810 425 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 ATL3Q6DD88 541 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 TTLL11Q8NHH1 800 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 PHKBQ93100 1093 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 MRFAP1L1Q96HT8 127 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 MYL10Q9BUA6 226 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 CNNM1Q9NRU3 951 aa24.27■■□□□ 1.48
RELA-201ENST00000308639 SPTLC2O15270 562 aa24.26■■□□□ 1.47
RELA-201ENST00000308639 CDC25BP30305 580 aa24.26■■□□□ 1.47
RELA-201ENST00000308639 CCDC69A6NI79 296 aa24.26■■□□□ 1.47
RELA-201ENST00000308639 CBX1P83916 185 aa24.26■■□□□ 1.47
RELA-201ENST00000308639 MROH7-TTC4A0A0A0MT08 1334 aa24.25■■□□□ 1.47
RELA-201ENST00000308639 KDM4FA0A1W2PPD8 638 aa24.25■■□□□ 1.47
RELA-201ENST00000308639 SKILP12757 684 aa24.25■■□□□ 1.47
RELA-201ENST00000308639 KIF23Q02241 960 aaPredicted RBP24.25■■□□□ 1.47
RELA-201ENST00000308639 FBXL16Q8N461 479 aa24.25■■□□□ 1.47
RELA-201ENST00000308639 B4E1Z4 1266 aa24.25■■□□□ 1.47
RELA-201ENST00000308639 WDHD1O75717 1129 aaPredicted RBP24.25■■□□□ 1.47
RELA-201ENST00000308639 PHKA1P46020 1223 aa24.25■■□□□ 1.47
RELA-201ENST00000308639 SPDYE4A6NLX3 237 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 ADD2P35612 726 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 LRRFIP1Q32MZ4 808 aaKnown RBP24.24■■□□□ 1.47
RELA-201ENST00000308639 NLRP10Q86W26 655 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 MICU3Q86XE3 530 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 KIAA1468Q9P260 1216 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 AKAP11Q9UKA4 1901 aa24.24■■□□□ 1.47
RELA-201ENST00000308639 CTIFO43310 598 aaKnown RBP24.23■■□□□ 1.47
RELA-201ENST00000308639 CDC27P30260 824 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 NBPF11Q86T75 865 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 CCZ1BP86790 482 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 CCZ1P86791 482 aaPredicted RBP24.23■■□□□ 1.47
RELA-201ENST00000308639 TRIM28Q13263 835 aaKnown RBP24.23■■□□□ 1.47
RELA-201ENST00000308639 SYNE3Q6ZMZ3 975 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 PDCL2Q8N4E4 241 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 SLC4A9Q96Q91 983 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 POLR3EQ9NVU0 708 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 ZNF532Q9HCE3 1301 aa24.23■■□□□ 1.47
RELA-201ENST00000308639 ZNF202O95125 648 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 ANO1Q5XXA6 986 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 GIGYF2Q6Y7W6 1299 aaKnown RBP24.22■■□□□ 1.47
RELA-201ENST00000308639 A0A1W2PQ27 194 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 A0A1W2PQ64 194 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 A0A1W2PQD8 194 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 DHX16O60231 1041 aaKnown RBP24.22■■□□□ 1.47
RELA-201ENST00000308639 PFKFB1P16118 471 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 U2AF2P26368 475 aaKnown RBP eCLIP24.22■■□□□ 1.47
RELA-201ENST00000308639 NCBP1Q09161 790 aaKnown RBP24.22■■□□□ 1.47
RELA-201ENST00000308639 AXDND1Q5T1B0 1012 aaPredicted RBP24.22■■□□□ 1.47
RELA-201ENST00000308639 STK11IPQ8N1F8 1099 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 KCNG4Q8TDN1 519 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 PLA2G12BQ9BX93 195 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 ZHX1Q9UKY1 873 aaPredicted RBP24.22■■□□□ 1.47
RELA-201ENST00000308639 MYH7P12883 1935 aa24.22■■□□□ 1.47
RELA-201ENST00000308639 CTSWP56202 376 aa24.21■■□□□ 1.47
RELA-201ENST00000308639 TICAM2Q86XR7 235 aa24.21■■□□□ 1.47
RELA-201ENST00000308639 ALG1Q9BT22 464 aa24.21■■□□□ 1.47
RELA-201ENST00000308639 TBC1D2BQ9UPU7 963 aa24.21■■□□□ 1.47
RELA-201ENST00000308639 IRS4O14654 1257 aaPredicted RBP24.21■■□□□ 1.47
RELA-201ENST00000308639 SYTL4Q96C24 671 aaPredicted RBP24.21■■□□□ 1.47
RELA-201ENST00000308639 TRMT112Q9UI30 125 aaKnown RBP24.21■■□□□ 1.47
RELA-201ENST00000308639 ZBTB1Q9Y2K1 713 aa24.21■■□□□ 1.47
RELA-201ENST00000308639 METAP2P50579 478 aaKnown RBP eCLIP24.2■■□□□ 1.47
RELA-201ENST00000308639 VGLL2Q8N8G2 317 aa24.2■■□□□ 1.47
RELA-201ENST00000308639 ANKRD7Q92527 254 aa24.2■■□□□ 1.47
RELA-201ENST00000308639 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.2■■□□□ 1.471e-6■□□□□ 10.8
RELA-201ENST00000308639 ANKRD18BA2A2Z9 1011 aa24.2■■□□□ 1.46
RELA-201ENST00000308639 SMC2O95347 1197 aa24.2■■□□□ 1.46
RELA-201ENST00000308639 YEATS4O95619 227 aa24.2■■□□□ 1.46
RELA-201ENST00000308639 TRDNQ13061 729 aa24.2■■□□□ 1.46
RELA-201ENST00000308639 CCDC102BQ68D86 513 aa24.2■■□□□ 1.46
RELA-201ENST00000308639 IFNKQ9P0W0 207 aa24.2■■□□□ 1.46
RELA-201ENST00000308639 ANGEL1Q9UNK9 670 aaKnown RBP24.2■■□□□ 1.46
RELA-201ENST00000308639 SMTNL1A8MU46 457 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 SLC3A2P08195 630 aaKnown RBP24.19■■□□□ 1.46
RELA-201ENST00000308639 CEP135Q66GS9 1140 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 XPO4Q9C0E2 1151 aaKnown RBP24.19■■□□□ 1.46
RELA-201ENST00000308639 FBXO3Q9UK99 471 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 PTPN21Q16825 1174 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 VPS37DQ86XT2 251 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 CLIC6Q96NY7 704 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 C4AP0C0L4 1744 aa24.19■■□□□ 1.46
RELA-201ENST00000308639 C4BP0C0L5 1744 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms