RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 SHTN1A0MZ66 631 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 NEMFO60524 1076 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
MSRB3-201ENST00000308259 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
MSRB3-201ENST00000308259 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
MSRB3-201ENST00000308259 SETSIPP0DME0 302 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 PDILTQ8N807 584 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 IL17RAQ96F46 866 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
MSRB3-201ENST00000308259 A0A1B0GUA9 196 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 MAP4K1Q92918 833 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 SGSM3Q96HU1 749 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 BABAM1Q9NWV8 329 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12□□□□□ -0.49
MSRB3-201ENST00000308259 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 KRT85P78386 507 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
MSRB3-201ENST00000308259 FUCA2Q9BTY2 467 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 ZNF75DP51815 510 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
MSRB3-201ENST00000308259 SPATA32Q96LK8 384 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 MED4Q9NPJ6 270 aa12□□□□□ -0.49
MSRB3-201ENST00000308259 USP27XA6NNY8 438 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 POLD1P28340 1107 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 PLA2G4AP47712 749 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 TFCP2Q12800 502 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 CHST3Q7LGC8 479 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 TADA2BQ86TJ2 420 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 ANKRD18AQ8IVF6 992 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 EPC1Q9H2F5 836 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 PXDNLA1KZ92 1463 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 A0A0G2JLW4 131 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 IL2RBP14784 551 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 INPP5BP32019 993 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 UBE3BQ7Z3V4 1068 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
MSRB3-201ENST00000308259 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
MSRB3-201ENST00000308259 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
MSRB3-201ENST00000308259 EFCAB13Q8IY85 973 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 EXOC4Q96A65 974 aa11.99□□□□□ -0.49
MSRB3-201ENST00000308259 NR1I2O75469 434 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 STARD3NLO95772 234 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 ARID5BQ14865 1188 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
MSRB3-201ENST00000308259 NAT10Q9H0A0 1025 aaKnown RBP11.98□□□□□ -0.49
MSRB3-201ENST00000308259 DDB1Q16531 1140 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 KIF6Q6ZMV9 814 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 SPATS2LQ9NUQ6 558 aaKnown RBP11.98□□□□□ -0.49
MSRB3-201ENST00000308259 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
MSRB3-201ENST00000308259 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 RPS6KB1P23443 525 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 MTX1Q13505 466 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 PDIA6Q15084 440 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 TMC6Q7Z403 805 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 SCLT1Q96NL6 688 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
MSRB3-201ENST00000308259 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
MSRB3-201ENST00000308259 GNG11P61952 73 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 CBX8Q9HC52 389 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
MSRB3-201ENST00000308259 IRF6O14896 467 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 CCT2P78371 535 aaKnown RBP11.97□□□□□ -0.49
MSRB3-201ENST00000308259 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 TRIM6Q9C030 488 aaPredicted RBP11.97□□□□□ -0.49
MSRB3-201ENST00000308259 PDE11AQ9HCR9 933 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 A0A087WUV0 522 aaPredicted RBP11.97□□□□□ -0.49
MSRB3-201ENST00000308259 NEDD9Q14511 834 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 Q6ZUG5 572 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 BRF1Q92994 677 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 ODF2LQ9ULJ1 636 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 H3BQV1 296 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 HOXB7P09629 217 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 PSMA5P28066 241 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 PSMD2Q13200 908 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 MFSD4BQ5TF39 518 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
MSRB3-201ENST00000308259 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
MSRB3-201ENST00000308259 COL15A1P39059 1388 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.49
MSRB3-201ENST00000308259 FBXW10Q5XX13 1052 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.49
MSRB3-201ENST00000308259 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.96□□□□□ -0.49
MSRB3-201ENST00000308259 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 DCAF8L1A6NGE4 600 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 NEURL1BA8MQ27 555 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms