RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TAF12Q16514 161 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 ZNF354CQ86Y25 554 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 SLC9C2Q5TAH2 1124 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC83Q8IWF9 413 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 SYCP3Q8IZU3 236 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 NAA15Q9BXJ9 866 aaKnown RBP9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 SPC25Q9HBM1 224 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 CSADQ9Y600 493 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 RPS8P62241 208 aaKnown RBP9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 NUCB1Q02818 461 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 IVNS1ABPQ9Y6Y0 642 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 KDRP35968 1356 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 ZBTB43O43298 467 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 ATL3Q6DD88 541 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 SAMM50Q9Y512 469 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 SSFA2P28290 1259 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 C6orf163Q5TEZ5 329 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 RTKN2Q8IZC4 609 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 SPC24Q8NBT2 197 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 TEKT1Q969V4 418 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 RRP36Q96EU6 259 aaKnown RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 SLC4A4Q9Y6R1 1079 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 ZNF335Q9H4Z2 1342 aaPredicted RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 STX6O43752 255 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 PAFAH1B1P43034 410 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 BBXQ8WY36 941 aaPredicted RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 SYNCQ9H7C4 482 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 TMEM131LA2VDJ0 1609 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 SHTN1A0MZ66 631 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 ITGA6P23229 1130 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 KIF22Q14807 665 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 FAM177A1Q8N128 213 aaPredicted RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 TTC12Q9H892 705 aaPredicted RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 RMND1Q9NWS8 449 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 V9GYY5 206 aaPredicted RBP9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
PCDHB1-201ENST00000306549 ZSCAN12O43309 604 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 LIG1P18858 919 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 BICD1Q96G01 975 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 RTN1Q16799 776 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 TTC22Q5TAA0 569 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 NUP62CLQ9H1M0 184 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 UBA7P41226 1012 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 CTSWP56202 376 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 CFAP100Q494V2 611 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC14Q49A88 953 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 GIMAP7Q8NHV1 300 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 KIF5CO60282 957 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 UBE4AQ14139 1066 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 PPP1R14CQ8TAE6 165 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 ZMYND15Q9H091 742 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 MCM9Q9NXL9 1143 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 IFI16Q16666 785 aaKnown RBP9.47□□□□□ -0.89
PCDHB1-201ENST00000306549 RNF113AO15541 343 aaKnown RBP9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 PPIP5K2O43314 1243 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 ARL1P40616 181 aaPredicted RBP9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 GCKRQ14397 625 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 DLGAP5Q15398 846 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 SUPT20HL1Q3ZLR7 823 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 SULF1Q8IWU6 871 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 TEX11Q8IYF3 940 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 NDC80O14777 642 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 ALS2CR12Q96Q35 445 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 DCTPP1Q9H773 170 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 PUF60Q9UHX1 559 aaKnown RBP9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 HMGB1P1B2RPK0 211 aaPredicted RBP9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 CKAP2LQ8IYA6 745 aa9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
PCDHB1-201ENST00000306549 XDHP47989 1333 aa9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 PPP1R2P41236 205 aa9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 PRPF31Q8WWY3 499 aaKnown RBP9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 TMEM87BQ96K49 555 aa9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 PCCAP05165 728 aaPredicted RBP9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 NPR1P16066 1061 aa9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 C8orf58Q8NAV2 365 aa9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.9
PCDHB1-201ENST00000306549 PRPF40BQ6NWY9 871 aaKnown RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 BICC1Q9H694 974 aaKnown RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 TRAK2O60296 914 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 GRM1Q13255 1194 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 MICALCLQ6ZW33 695 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 KIAA1524Q8TCG1 905 aa9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 DCPSQ96C86 337 aaKnown RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 MAP4K4O95819 1239 aaPredicted RBP9.45□□□□□ -0.9
PCDHB1-201ENST00000306549 ZBTB24O43167 697 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms