RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 RAI14Q9P0K7 980 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 TRPC5Q9UL62 973 aaPredicted RBP13.43□□□□□ -0.26
SCG2-201ENST00000305409 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 BTAF1O14981 1849 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 KLF18A0A0U1RQI7 1052 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 MBD3O95983 291 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 ZNF445P59923 1031 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 CCDC144CPQ8IYA2 1237 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 NCOA7Q8NI08 942 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 COL5A3P25940 1745 aaPredicted RBP13.43□□□□□ -0.26
SCG2-201ENST00000305409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
SCG2-201ENST00000305409 PDCP20941 246 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 CYP7A1P22680 504 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 MCM5P33992 734 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 NFIXQ14938 502 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 TXNRD3Q86VQ6 643 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 SDR42E1Q8WUS8 393 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
SCG2-201ENST00000305409 GPR101Q96P66 508 aaPredicted RBP13.42□□□□□ -0.26
SCG2-201ENST00000305409 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 NEDD4P46934 1319 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 RREB1Q92766 1687 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 RTL9Q8NET4 1388 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 CHAF1AQ13111 956 aaPredicted RBP13.42□□□□□ -0.26
SCG2-201ENST00000305409 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
SCG2-201ENST00000305409 TTC6Q86TZ1 520 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 IFNL3Q8IZI9 196 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 FTOQ9C0B1 505 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCG2-201ENST00000305409 NAPBQ9H115 298 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 SLC4A4Q9Y6R1 1079 aa13.42□□□□□ -0.26
SCG2-201ENST00000305409 LRP5O75197 1615 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 GOLGA8BA8MQT2 603 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
SCG2-201ENST00000305409 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 NYXQ9GZU5 481 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 TRDNQ13061 729 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 MYL10Q9BUA6 226 aa13.41□□□□□ -0.26
SCG2-201ENST00000305409 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
SCG2-201ENST00000305409 TM4SF1P30408 202 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 DYNLL1P63167 89 aaKnown RBP13.4□□□□□ -0.26
SCG2-201ENST00000305409 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 TDO2P48775 406 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 UBE2HP62256 183 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 TMEM87AQ8NBN3 555 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
SCG2-201ENST00000305409 HPS5Q9UPZ3 1129 aa13.4□□□□□ -0.26
SCG2-201ENST00000305409 COL1A1P02452 1464 aaPredicted RBP13.4□□□□□ -0.26
SCG2-201ENST00000305409 FDPSP14324 419 aaKnown RBP13.39□□□□□ -0.27
SCG2-201ENST00000305409 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 ONECUT3O60422 494 aaPredicted RBP13.39□□□□□ -0.27
SCG2-201ENST00000305409 KRT85P78386 507 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 EVX2Q03828 476 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 SLC4A8Q2Y0W8 1093 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
SCG2-201ENST00000305409 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
SCG2-201ENST00000305409 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
SCG2-201ENST00000305409 RESTQ13127 1097 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
SCG2-201ENST00000305409 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
SCG2-201ENST00000305409 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
SCG2-201ENST00000305409 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 LIG1P18858 919 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 CAMK4Q16566 473 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 SPATA32Q96LK8 384 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 ISY1Q9ULR0 285 aaKnown RBP13.37□□□□□ -0.27
SCG2-201ENST00000305409 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 ATRNO75882 1429 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 CPLX1O14810 134 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 PRDX5P30044 214 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 NFXL1Q6ZNB6 911 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 LLPHQ9BRT6 129 aaKnown RBP13.37□□□□□ -0.27
SCG2-201ENST00000305409 MYH7P12883 1935 aa13.37□□□□□ -0.27
SCG2-201ENST00000305409 HIBADHP31937 336 aaKnown RBP13.36□□□□□ -0.27
SCG2-201ENST00000305409 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
SCG2-201ENST00000305409 PHKBQ93100 1093 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 ANGEL1Q9UNK9 670 aaKnown RBP13.36□□□□□ -0.27
SCG2-201ENST00000305409 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 GYS1P13807 737 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 CDC27P30260 824 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 TMEM67Q5HYA8 995 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms