RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TDRD7Q8NHU6 1098 aaKnown RBP18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 WDR66Q8TBY9 1149 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 ZMYM6O95789 1325 aa18.66■□□□□ 0.58
HERPUD1-201ENST00000300302 H0YIN7 160 aa18.66■□□□□ 0.58
HERPUD1-201ENST00000300302 ALX1Q15699 326 aa18.66■□□□□ 0.58
HERPUD1-201ENST00000300302 ILDR2Q71H61 639 aa18.66■□□□□ 0.58
HERPUD1-201ENST00000300302 TBC1D16Q8TBP0 767 aa18.66■□□□□ 0.58
HERPUD1-201ENST00000300302 C6orf229H3BNL8 230 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 ZBTB7AO95365 584 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 NUCB2P80303 420 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 STOX1Q6ZVD7 989 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 DHX32Q7L7V1 743 aaKnown RBP18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 C2CD5Q86YS7 1000 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 NACAP1Q9BZK3 213 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 ARMT1Q9H993 441 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 COL11A2P13942 1736 aaPredicted RBP18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 SALL1Q9NSC2 1324 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 STYK1Q6J9G0 422 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 POLLQ9UGP5 575 aa18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.65■□□□□ 0.58
HERPUD1-201ENST00000300302 MAGEB6P1A0A0J9YX57 407 aa18.64■□□□□ 0.57
HERPUD1-201ENST00000300302 RAB3GAP1Q15042 981 aa18.64■□□□□ 0.57
HERPUD1-201ENST00000300302 ZNF622Q969S3 477 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■□□□ 11.7
HERPUD1-201ENST00000300302 LTBP1Q14766 1721 aa18.64■□□□□ 0.57
HERPUD1-201ENST00000300302 CACNA1SQ13698 1873 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 HAND2P61296 217 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 FGD1P98174 961 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 LCORLQ8N3X6 602 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 MIGA1Q8NAN2 632 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 NSUN4Q96CB9 384 aaKnown RBP18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 GPR101Q96P66 508 aaPredicted RBP18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 LARP6Q9BRS8 491 aaKnown RBP18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 NAPBQ9H115 298 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 CD209Q9NNX6 404 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 SLC4A4Q9Y6R1 1079 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 MAST2Q6P0Q8 1798 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 A0A0G2JLW4 131 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 IL1R1P14778 569 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 MECOMQ03112 1051 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 IFNL3Q8IZI9 196 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 MPNDQ8N594 471 aa18.63■□□□□ 0.57
HERPUD1-201ENST00000300302 LAMA4Q16363 1823 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 PSDA5PKW4 1024 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 Q6ZUG5 572 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 ADGRA1Q86SQ6 560 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 DZIP1Q86YF9 867 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 NCOA7Q8NI08 942 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 TPCN1Q9ULQ1 816 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 ATF5Q9Y2D1 282 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 DUOX1Q9NRD9 1551 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 CCDC88AQ3V6T2 1871 aa18.62■□□□□ 0.57
HERPUD1-201ENST00000300302 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
HERPUD1-201ENST00000300302 LDHBP07195 334 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-201ENST00000300302 TRDNQ13061 729 aa18.61■□□□□ 0.57
HERPUD1-201ENST00000300302 COL9A3Q14050 684 aaPredicted RBP18.61■□□□□ 0.57
HERPUD1-201ENST00000300302 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
HERPUD1-201ENST00000300302 RALYLQ86SE5 291 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-201ENST00000300302 PRDX5P30044 214 aa18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 TDO2P48775 406 aa18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 ME3Q16798 604 aa18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 CNKSR1Q969H4 720 aa18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 RIOK1Q9BRS2 568 aaKnown RBP18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 ZC3H12CQ9C0D7 883 aaKnown RBP18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 EPB41L4AQ9HCS5 686 aaPredicted RBP18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 JAG2Q9Y219 1238 aa18.6■□□□□ 0.57
HERPUD1-201ENST00000300302 LARGE1O95461 756 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 MCM5P33992 734 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 GSTO1P78417 241 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 ZNF384Q8TF68 577 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 GBP4Q96PP9 640 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 EYA3Q99504 573 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 COA1Q9GZY4 146 aa18.59■□□□□ 0.57
HERPUD1-201ENST00000300302 PRKAB2O43741 272 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 CHRNA5P30532 468 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 CCDC83Q8IWF9 413 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 FBXL16Q8N461 479 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 TBC1D22AQ8WUA7 517 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 SMC3Q9UQE7 1217 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 WDR19Q8NEZ3 1342 aa18.58■□□□□ 0.57
HERPUD1-201ENST00000300302 BRF1Q92994 677 aa18.58■□□□□ 0.56
HERPUD1-201ENST00000300302 AGXT2Q9BYV1 514 aa18.58■□□□□ 0.56
HERPUD1-201ENST00000300302 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
HERPUD1-201ENST00000300302 KIAA1551Q9HCM1 1747 aa18.58■□□□□ 0.56
HERPUD1-201ENST00000300302 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
HERPUD1-201ENST00000300302 LDHCP07864 332 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 TBC1D10CQ8IV04 446 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 LRRC2Q9BYS8 371 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 CRNKL1Q9BZJ0 848 aaKnown RBP18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 NBPF3Q9H094 633 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 DYNLL1P63167 89 aaKnown RBP18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 SDR42E1Q8WUS8 393 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 NOL10Q9BSC4 688 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms