RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PALD1Q9ULE6 856 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 ZDHHC9Q9Y397 364 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 BBOX1O75936 387 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 SPATA5Q8NB90 893 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 GPR101Q96P66 508 aaPredicted RBP7.88□□□□□ -1.15
TMC1-201ENST00000297784 KCNA3P22001 575 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 IQSEC3Q9UPP2 1182 aaPredicted RBP7.87□□□□□ -1.15
TMC1-201ENST00000297784 RFX7Q2KHR2 1363 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 SNED1Q8TER0 1413 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 TCRBV5S4A2TA0A5A2 114 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 FOXP2O15409 715 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 PTMAP06454 111 aaKnown RBP7.87□□□□□ -1.15
TMC1-201ENST00000297784 CHRNA5P30532 468 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 PDE6BP35913 854 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 CNKSR2Q8WXI2 1034 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
TMC1-201ENST00000297784 IL17RAQ96F46 866 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 ANKRD2Q9GZV1 360 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 ANO2Q9NQ90 1003 aa7.87□□□□□ -1.15
TMC1-201ENST00000297784 BRCA1P38398 1863 aaKnown RBP7.87□□□□□ -1.15
TMC1-201ENST00000297784 REC8O95072 547 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 NPR1P16066 1061 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 COL9A3Q14050 684 aaPredicted RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 SYCP1Q15431 976 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 DNTTIP2Q5QJE6 756 aaKnown RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 C10orf71Q711Q0 1435 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 PDCL2Q8N4E4 241 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 IPO4Q8TEX9 1081 aaKnown RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 ZNF384Q8TF68 577 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 OSBP2Q969R2 916 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 MASTLQ96GX5 879 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 DIAPH3Q9NSV4 1193 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 ANKIB1Q9P2G1 1089 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 ZNF646O15015 1829 aaPredicted RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 XDHP47989 1333 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 RAD50Q92878 1312 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 M0R2C6 588 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 CTIFO43310 598 aaKnown RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 GABPB1Q06547 395 aaPredicted RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 PKP1Q13835 747 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 ZMYM1Q5SVZ6 1142 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 SP8Q8IXZ3 490 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 C7orf43Q8WVR3 580 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 MAP4K1Q92918 833 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 NSFL1CQ9UNZ2 370 aaKnown RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 ATP6V0A2Q9Y487 856 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 PPEF1O14829 653 aaPredicted RBP7.86□□□□□ -1.15
TMC1-201ENST00000297784 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 UQCRFS1P1P0C7P4 283 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 HSPA4P34932 840 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 NECTIN1Q15223 517 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 VPS53Q5VIR6 699 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 RASEFQ8IZ41 740 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 TBC1D16Q8TBP0 767 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 SGIP1Q9BQI5 828 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 TAF6LQ9Y6J9 622 aa7.86□□□□□ -1.15
TMC1-201ENST00000297784 RNF113AO15541 343 aaKnown RBP7.85□□□□□ -1.15
TMC1-201ENST00000297784 ST18O60284 1047 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 R3HDM1Q15032 1099 aaKnown RBP7.85□□□□□ -1.15
TMC1-201ENST00000297784 MCMDC2Q4G0Z9 681 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 C15orf52Q6ZUT6 534 aaKnown RBP7.85□□□□□ -1.15
TMC1-201ENST00000297784 TICAM2Q86XR7 235 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 OGFRQ9NZT2 677 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 LEMD3Q9Y2U8 911 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 MAST3O60307 1309 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 HIP1O00291 1037 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 HOXD11P31277 338 aaPredicted RBP7.85□□□□□ -1.15
TMC1-201ENST00000297784 ADGRA1Q86SQ6 560 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 C2CD5Q86YS7 1000 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 NAP1L2Q9ULW6 460 aaPredicted RBP7.85□□□□□ -1.15
TMC1-201ENST00000297784 LAMA4Q16363 1823 aa7.85□□□□□ -1.15
TMC1-201ENST00000297784 CCDC88AQ3V6T2 1871 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 CCDC171Q6TFL3 1326 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 A0A0G2JLW4 131 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 EPB41L2O43491 1005 aaKnown RBP7.84□□□□□ -1.15
TMC1-201ENST00000297784 ALDH1B1P30837 517 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 HIBADHP31937 336 aaKnown RBP7.84□□□□□ -1.15
TMC1-201ENST00000297784 ADD2P35612 726 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 KCNB2Q92953 911 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 H0YIN7 160 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 BRD1O95696 1058 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 TPM3P06753 285 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 SLC20A2Q08357 652 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 CAVIN4Q5BKX8 364 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 SLC9C2Q5TAH2 1124 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 STYK1Q6J9G0 422 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 HELLSQ9NRZ9 838 aa7.84□□□□□ -1.15
TMC1-201ENST00000297784 ATF5Q9Y2D1 282 aaPredicted RBP7.84□□□□□ -1.15
TMC1-201ENST00000297784 PRPF40BQ6NWY9 871 aaKnown RBP7.84□□□□□ -1.16
TMC1-201ENST00000297784 ILDR2Q71H61 639 aa7.84□□□□□ -1.16
TMC1-201ENST00000297784 TDRD7Q8NHU6 1098 aaKnown RBP7.84□□□□□ -1.16
TMC1-201ENST00000297784 RUFY2Q8WXA3 655 aa7.84□□□□□ -1.16
TMC1-201ENST00000297784 TSC1Q92574 1164 aa7.84□□□□□ -1.16
TMC1-201ENST00000297784 ZNF622Q969S3 477 aaKnown RBP eCLIP7.84□□□□□ -1.16
TMC1-201ENST00000297784 SCN9AQ15858 1988 aa7.84□□□□□ -1.16
TMC1-201ENST00000297784 UFL1O94874 794 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms