RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 C1orf141Q5JVX7 400 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 OPTNQ96CV9 577 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 PALM3A6NDB9 673 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-201ENST00000297405 TTC36A6NLP5 189 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 G3V3G9 751 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 SP100P23497 879 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-201ENST00000297405 ALDH1L2Q3SY69 923 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 DCAF8Q5TAQ9 597 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 CATSPER1Q8NEC5 780 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 TNPO1Q92973 898 aaKnown RBP5.42□□□□□ -1.54
CSMD3-201ENST00000297405 DNAJC25Q9H1X3 360 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 MRPL40Q9NQ50 206 aaKnown RBP5.42□□□□□ -1.54
CSMD3-201ENST00000297405 ORC6Q9Y5N6 252 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 SUN1O94901 812 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 RWDD2BP57060 319 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 PPP2R3AQ06190 1150 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 TEX9Q8N6V9 391 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 PIKFYVEQ9Y2I7 2098 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 SPDYE4A6NLX3 237 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 KRT4P19013 534 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 MAP7D3Q8IWC1 876 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 CALR3Q96L12 384 aaKnown RBP5.42□□□□□ -1.54
CSMD3-201ENST00000297405 SIN3AQ96ST3 1273 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 SPZ1Q9BXG8 430 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 TUBA4AP68366 448 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 SLC20A2Q08357 652 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 KIF9Q9HAQ2 790 aa5.42□□□□□ -1.54
CSMD3-201ENST00000297405 ASCC3Q8N3C0 2202 aaKnown RBP5.42□□□□□ -1.54
CSMD3-201ENST00000297405 CACNA1IQ9P0X4 2223 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 BBOF1Q8ND07 529 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 PPP1R12AO14974 1030 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 STX6O43752 255 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 MAP3K10Q02779 954 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 CHMP7Q8WUX9 453 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TACC3Q9Y6A5 838 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 DOCK11Q5JSL3 2073 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD20A3Q5VUR7 823 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SMC5Q8IY18 1101 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 FAM186BQ8IYM0 893 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ZNF148Q9UQR1 794 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SCN3AQ9NY46 2000 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 UBL4BQ8N7F7 174 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 PRPF31Q8WWY3 499 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TCP11L1Q9NUJ3 509 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANGPTL2Q9UKU9 493 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 REREQ9P2R6 1566 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SNX16P57768 344 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 CNNM3Q8NE01 707 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 MAIP1Q8WWC4 291 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 RIOK1Q9BRS2 568 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD2Q9GZV1 360 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TFIP11Q9UBB9 837 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 CD2APQ9Y5K6 639 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 INSRP06213 1382 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 CFAP221Q4G0U5 840 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 STK24Q9Y6E0 443 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 RASGRF2O14827 1237 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 PAK3O75914 559 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TRIM37O94972 964 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SYTL4Q96C24 671 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 XAB2Q9HCS7 855 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 RNF14Q9UBS8 474 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 GMEB1Q9Y692 573 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 CCDC169A6NNP5 214 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SYT1P21579 422 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD20A4Q4UJ75 823 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD20A8PQ5CZ79 823 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD20A2Q5SQ80 823 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD20A1Q5TYW2 823 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 LRRC43Q8N309 656 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 MRPL46Q9H2W6 279 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 E7ENQ6 273 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TUBA3CQ13748 450 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TRIML1Q8N9V2 468 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 GSDMBQ8TAX9 411 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 THOC1Q96FV9 657 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 NDUFA13Q9P0J0 144 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 AKR1B10O60218 316 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 C8orf76Q96K31 380 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SYNCQ9H7C4 482 aa5.41□□□□□ -1.54
CSMD3-201ENST00000297405 TYW1Q9NV66 732 aaKnown RBP5.41□□□□□ -1.54
CSMD3-201ENST00000297405 SFSWAPQ12872 951 aaKnown RBP5.4□□□□□ -1.54
CSMD3-201ENST00000297405 PKD2Q13563 968 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 FNBP4Q8N3X1 1017 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-201ENST00000297405 TERB1Q8NA31 727 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 SEPT3Q9UH03 358 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 PSMA7O14818 248 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 KRT5P13647 590 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 MAN1A1P33908 653 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 CRYMQ14894 314 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 CCDC84Q86UT8 332 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-201ENST00000297405 N4BP2L2Q92802 583 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-201ENST00000297405 PDRG1Q9NUG6 133 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 ANKRD36BQ8N2N9 1353 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 CFAP73A6NFT4 308 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 TMCC1O94876 653 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 TRIM63Q969Q1 353 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 INAQ16352 499 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 ZNF653Q96CK0 615 aa5.4□□□□□ -1.54
CSMD3-201ENST00000297405 CFAP36Q96G28 342 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms