RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 MAP3K12Q12852 859 aa15.51■□□□□ 0.07
RUBCN-202ENST00000296343 LEO1Q8WVC0 666 aaPredicted RBP15.51■□□□□ 0.07
RUBCN-202ENST00000296343 CTNNA3Q9UI47 895 aa15.51■□□□□ 0.07
RUBCN-202ENST00000296343 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
RUBCN-202ENST00000296343 CYP7A1P22680 504 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 LRRFIP1Q32MZ4 808 aaKnown RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 SPC24Q8NBT2 197 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 NUP133Q8WUM0 1156 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 SETDB2Q96T68 719 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 CDCA7Q9BWT1 371 aaPredicted RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 PFKFB2O60825 505 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 ZFYP08048 801 aaPredicted RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 HMGB1P09429 215 aaKnown RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 PGBD1Q96JS3 809 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 USP28Q96RU2 1077 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 EPB41L4AQ9HCS5 686 aaPredicted RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 ORC3Q9UBD5 711 aaPredicted RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 ZNF652Q9Y2D9 606 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 COL22A1Q8NFW1 1626 aaPredicted RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 SPATA31A6Q5VVP1 1343 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 FDPSP14324 419 aaKnown RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 ME1P48163 572 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 DYNLL1P63167 89 aaKnown RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 CCDC173Q0VFZ6 552 aa15.5■□□□□ 0.07
RUBCN-202ENST00000296343 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
RUBCN-202ENST00000296343 MROH5Q6ZUA9 1318 aa15.49■□□□□ 0.07
RUBCN-202ENST00000296343 TAF1P21675 1872 aa15.49■□□□□ 0.07
RUBCN-202ENST00000296343 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
RUBCN-202ENST00000296343 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
RUBCN-202ENST00000296343 IFNL3Q8IZI9 196 aa15.49■□□□□ 0.07
RUBCN-202ENST00000296343 FGFR2P21802 821 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 ISM2Q6H9L7 571 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 LUZP1Q86V48 1076 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 C17orf53Q8N3J3 647 aaPredicted RBP15.48■□□□□ 0.07
RUBCN-202ENST00000296343 ARHGEF1Q92888 912 aaKnown RBP15.48■□□□□ 0.07
RUBCN-202ENST00000296343 TNMDQ9H2S6 317 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 BCL2L12Q9HB09 334 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 ZSWIM5Q9P217 1185 aa15.48■□□□□ 0.07
RUBCN-202ENST00000296343 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
RUBCN-202ENST00000296343 IFIT3O14879 490 aaKnown RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 TTF1Q15361 905 aaPredicted RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 TMEM67Q5HYA8 995 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 MB21D2Q8IYB1 491 aaPredicted RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 C8orf76Q96K31 380 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 ISY1Q9ULR0 285 aaKnown RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 ABCC12Q96J65 1359 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 MSNP26038 577 aaKnown RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 MARCKSP29966 332 aaPredicted RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 RESTQ13127 1097 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 GNL2Q13823 731 aaKnown RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 PARP10Q53GL7 1025 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 SMARCC1Q92922 1105 aaPredicted RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 NUP62CLQ9H1M0 184 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 MINPP1Q9UNW1 487 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 CDC27P30260 824 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 RFC4P35249 363 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 CDC5LQ99459 802 aaKnown RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 ANKIB1Q9P2G1 1089 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 HPS5Q9UPZ3 1129 aa15.47■□□□□ 0.07
RUBCN-202ENST00000296343 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
RUBCN-202ENST00000296343 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.07
RUBCN-202ENST00000296343 COL14A1Q05707 1796 aaKnown RBP15.46■□□□□ 0.07
RUBCN-202ENST00000296343 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.07
RUBCN-202ENST00000296343 COL4A1P02462 1669 aa15.46■□□□□ 0.07
RUBCN-202ENST00000296343 NUP98P52948 1817 aa15.46■□□□□ 0.07
RUBCN-202ENST00000296343 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.06
RUBCN-202ENST00000296343 NLRP3Q96P20 1036 aa15.46■□□□□ 0.06
RUBCN-202ENST00000296343 AATFQ9NY61 560 aaKnown RBP eCLIP15.46■□□□□ 0.06
RUBCN-202ENST00000296343 A0A1B0GVL5 298 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 TCRBV5S4A2TA0A5A2 114 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 ARID4AP29374 1257 aaPredicted RBP15.45■□□□□ 0.06
RUBCN-202ENST00000296343 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 CARMIL3Q8ND23 1372 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 PLEKHG2Q9H7P9 1386 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 GSG1L2A8MUP6 293 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 PRDX5P30044 214 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.45■□□□□ 0.06
RUBCN-202ENST00000296343 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
RUBCN-202ENST00000296343 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
RUBCN-202ENST00000296343 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
RUBCN-202ENST00000296343 ADCY5O95622 1261 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 SLC26A6Q9BXS9 759 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
RUBCN-202ENST00000296343 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 NFIXQ14938 502 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 CAVIN4Q5BKX8 364 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 MFSD6Q6ZSS7 791 aa15.44■□□□□ 0.06
RUBCN-202ENST00000296343 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
RUBCN-202ENST00000296343 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.44■□□□□ 0.06
RUBCN-202ENST00000296343 RPS8P62241 208 aaKnown RBP15.44■□□□□ 0.06
RUBCN-202ENST00000296343 SPECC1Q5M775 1068 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms