RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RRAGBQ5VZM2 374 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 FBF1Q8TES7 1133 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 UTP14AQ9BVJ6 771 aaKnown RBP19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 NYXQ9GZU5 481 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 MAP2K2P36507 400 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 HOOK3Q86VS8 718 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 CUL5Q93034 780 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 KRT23Q9C075 422 aa19.81■□□□□ 0.76
PCDHA13-201ENST00000289272 IGSF3O75054 1194 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 SSBP05455 408 aaKnown RBP eCLIP19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 CPLX4Q7Z7G2 160 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 MRFAP1L1Q96HT8 127 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 CCDC40Q4G0X9 1142 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 TMEM63CQ9P1W3 806 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 KIAA0232Q92628 1395 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 IBSPP21815 317 aaPredicted RBP19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 TRAF1Q13077 416 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 NBPF6Q5VWK0 638 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 NBPF5PQ86XG9 351 aaPredicted RBP19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 NBPF4Q96M43 638 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 ALG1Q9BT22 464 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 DNAI2Q9GZS0 605 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 ABCC4O15439 1325 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 NLRP5P59047 1200 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 IQCDQ96DY2 449 aa19.8■□□□□ 0.76
PCDHA13-201ENST00000289272 TTC37Q6PGP7 1564 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 UBA7P41226 1012 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 STXBP4Q6ZWJ1 553 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 MED4Q9NPJ6 270 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 EXOC1Q9NV70 894 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 MYOM2P54296 1465 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 FCHSD1Q86WN1 690 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 PAG1Q9NWQ8 432 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 GOLGA6CA6NDK9 693 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 PPFIA3O75145 1194 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 GOLGA6DP0CG33 693 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 LMNTD2Q8IXW0 634 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 GOLGA6AQ9NYA3 693 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 HLA-DOAP06340 250 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 ATP5DP30049 168 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 ATP2B3Q16720 1220 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 WDR66Q8TBY9 1149 aa19.79■□□□□ 0.76
PCDHA13-201ENST00000289272 GCP02774 474 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 NBPF7P0C2Y1 421 aaPredicted RBP19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 CCDC51Q96ER9 411 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 DDX21Q9NR30 783 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 ATP6V1AP38606 617 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 CCDC144CPQ8IYA2 1237 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 TM6SF1Q9BZW5 370 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 TRIM7Q9C029 511 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 PRDM15P57071 1507 aaPredicted RBP19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 PSDA5PKW4 1024 aaPredicted RBP19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 NDUFAB1O14561 156 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 RAB11FIP4Q86YS3 637 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 CRNKL1Q9BZJ0 848 aaKnown RBP19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 NFATC2IPQ8NCF5 419 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 SIRT1Q96EB6 747 aa19.78■□□□□ 0.76
PCDHA13-201ENST00000289272 KCNA6P17658 529 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 CYP26C1Q6V0L0 522 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 CCDC42Q96M95 316 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 SLC26A6Q9BXS9 759 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 CEP128Q6ZU80 1094 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 SETDB2Q96T68 719 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 CARD6Q9BX69 1037 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 PUF60Q9UHX1 559 aaKnown RBP19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 WHAMMP3Q1A5X7 153 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 TMTC1Q8IUR5 882 aa19.77■□□□□ 0.76
PCDHA13-201ENST00000289272 MATR3P43243 847 aaKnown RBP eCLIP19.77■□□□□ 0.75
PCDHA13-201ENST00000289272 NLRP12P59046 1061 aa19.77■□□□□ 0.75
PCDHA13-201ENST00000289272 LUC7L2Q9Y383 392 aaKnown RBP19.77■□□□□ 0.75
PCDHA13-201ENST00000289272 CEP83Q9Y592 693 aa19.77■□□□□ 0.75
PCDHA13-201ENST00000289272 ZBTB43O43298 467 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 RHOXF2BP0C7M4 288 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 NOP2P46087 812 aaKnown RBP19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 MAP3K9P80192 1104 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 RUFY4Q6ZNE9 571 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 DHX32Q7L7V1 743 aaKnown RBP19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 RHOXF2Q9BQY4 288 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 BICC1Q9H694 974 aaKnown RBP19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 TSKSQ9UJT2 592 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 NAA16Q6N069 864 aaPredicted RBP19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 NLRP3Q96P20 1036 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 ANTXR1Q9H6X2 564 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 PPFIA4O75335 1185 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 SETSIPP0DME0 302 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 SETDB1Q15047 1291 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 MLKLQ8NB16 471 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 CEP63Q96MT8 703 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 SCLT1Q96NL6 688 aa19.76■□□□□ 0.75
PCDHA13-201ENST00000289272 NAA25Q14CX7 972 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 ZFP91Q96JP5 570 aaPredicted RBP19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 PREX2Q70Z35 1606 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 ATP11AP98196 1134 aa19.75■□□□□ 0.75
PCDHA13-201ENST00000289272 PPFIBP2Q8ND30 876 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms