RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PRDM1O75626 825 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 ADCY5O95622 1261 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 IVNS1ABPQ9Y6Y0 642 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 UQCRHLA0A096LP55 91 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 PPIP5K2O43314 1243 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 UQCRHP07919 91 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 CA8P35219 290 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 AATFQ9NY61 560 aaKnown RBP eCLIP21.04■□□□□ 0.96
PCDH1-201ENST00000287008 MCM3P25205 808 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 DLGAP5Q15398 846 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 IFI16Q16666 785 aaKnown RBP21.04■□□□□ 0.96
PCDH1-201ENST00000287008 UVSSAQ2YD98 709 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 PLVAPQ9BX97 442 aa21.04■□□□□ 0.96
PCDH1-201ENST00000287008 CCDC113Q9H0I3 377 aa21.03■□□□□ 0.96
PCDH1-201ENST00000287008 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
PCDH1-201ENST00000287008 IQUBQ8NA54 791 aa21.03■□□□□ 0.96
PCDH1-201ENST00000287008 ZBTB21Q9ULJ3 1066 aa21.03■□□□□ 0.96
PCDH1-201ENST00000287008 CCDC66A2RUB6 948 aa21.03■□□□□ 0.96
PCDH1-201ENST00000287008 CCDC129Q6ZRS4 1044 aa21.03■□□□□ 0.96
PCDH1-201ENST00000287008 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.03■□□□□ 0.96
PCDH1-201ENST00000287008 USP48Q86UV5 1035 aa21.02■□□□□ 0.96
PCDH1-201ENST00000287008 PPM1FP49593 454 aaPredicted RBP21.02■□□□□ 0.96
PCDH1-201ENST00000287008 IL17REQ8NFR9 667 aa21.02■□□□□ 0.96
PCDH1-201ENST00000287008 IFFO1Q0D2I5 559 aa21.02■□□□□ 0.96
PCDH1-201ENST00000287008 QTRT2Q9H974 415 aaKnown RBP21.02■□□□□ 0.96
PCDH1-201ENST00000287008 ANGEL1Q9UNK9 670 aaKnown RBP21.02■□□□□ 0.96
PCDH1-201ENST00000287008 BRDTQ58F21 947 aaPredicted RBP21.02■□□□□ 0.95
PCDH1-201ENST00000287008 DYDC1Q8WWB3 177 aa21.02■□□□□ 0.95
PCDH1-201ENST00000287008 GLT8D2Q9H1C3 349 aa21.02■□□□□ 0.95
PCDH1-201ENST00000287008 ERBB4Q15303 1308 aa21.02■□□□□ 0.95
PCDH1-201ENST00000287008 HLTFQ14527 1009 aaKnown RBP eCLIP21.01■□□□□ 0.95
PCDH1-201ENST00000287008 LETM2Q2VYF4 491 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 HSP90AA4PQ58FG1 418 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 INTS4Q96HW7 963 aaKnown RBP21.01■□□□□ 0.95
PCDH1-201ENST00000287008 INSRP06213 1382 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 CYLC1P35663 651 aaPredicted RBP21.01■□□□□ 0.95
PCDH1-201ENST00000287008 SPECC1Q5M775 1068 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 SPATA5Q8NB90 893 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 NEURL1BA8MQ27 555 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 H7C1D1 291 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 SLC1A4P43007 532 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 ZYXQ15942 572 aaKnown RBP21.01■□□□□ 0.95
PCDH1-201ENST00000287008 BCS1LQ9Y276 419 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 EHBP1Q8NDI1 1231 aa21.01■□□□□ 0.95
PCDH1-201ENST00000287008 PNMA6EA0A0J9YXQ4 647 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 FAM200AQ8TCP9 573 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21■□□□□ 0.95
PCDH1-201ENST00000287008 KIAA0232Q92628 1395 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 LOC102724428A0A0B4J2F2 783 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 SIK1P57059 783 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 GOPCQ9HD26 462 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 DEXIO95424 95 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 C16orf45Q96MC5 204 aaPredicted RBP21■□□□□ 0.95
PCDH1-201ENST00000287008 USP26Q9BXU7 913 aa21■□□□□ 0.95
PCDH1-201ENST00000287008 AOX1Q06278 1338 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 RILPL1Q5EBL4 403 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 MSL1Q68DK7 614 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 OTUD7AQ8TE49 926 aaPredicted RBP20.99■□□□□ 0.95
PCDH1-201ENST00000287008 TCP10Q12799 353 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 CCDC91Q7Z6B0 441 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 CARD10Q9BWT7 1032 aa20.99■□□□□ 0.95
PCDH1-201ENST00000287008 GTF2IP78347 998 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 FAM212AQ96EL1 285 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 IBTKQ9P2D0 1353 aaPredicted RBP20.98■□□□□ 0.95
PCDH1-201ENST00000287008 ZAP70P43403 619 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 CTSWP56202 376 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 ANO6Q4KMQ2 910 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 PLEKHG1Q9ULL1 1385 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 BICDL2A1A5D9 508 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 PRKG1Q13976 671 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 MFSD14BQ5SR56 506 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 PDCL2Q8N4E4 241 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 MRVI1Q9Y6F6 885 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 NPHP4O75161 1426 aaPredicted RBP20.98■□□□□ 0.95
PCDH1-201ENST00000287008 MAPKAPK5Q8IW41 473 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 JADE2Q9NQC1 790 aa20.98■□□□□ 0.95
PCDH1-201ENST00000287008 GPR162Q16538 588 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 V9GY48 417 aaPredicted RBP20.97■□□□□ 0.95
PCDH1-201ENST00000287008 KCNQ3O43525 872 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 CPA1P15085 419 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 PKD2L1Q9P0L9 805 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 RPS6KB1P23443 525 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 NOD1Q9Y239 953 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 GNG11P61952 73 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 TNFAIP1Q13829 316 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 ZSCAN23Q3MJ62 389 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 LRSAM1Q6UWE0 723 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 TTLL7Q6ZT98 887 aa20.97■□□□□ 0.95
PCDH1-201ENST00000287008 ATL3Q6DD88 541 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 ARHGEF25Q86VW2 580 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 FAM227BQ96M60 508 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 BEGAINQ9BUH8 593 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 ZNF532Q9HCE3 1301 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 KIF4AO95239 1232 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 CPXCR1Q8N123 301 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 CNKSR1Q969H4 720 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms