RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
SKA1-201ENST00000285116 ARID5BQ14865 1188 aa12.04□□□□□ -0.48
SKA1-201ENST00000285116 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
SKA1-201ENST00000285116 STRCP1A6NGW2 1772 aa12.04□□□□□ -0.48
SKA1-201ENST00000285116 FSIP1Q8NA03 581 aa12.04□□□□□ -0.48
SKA1-201ENST00000285116 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
SKA1-201ENST00000285116 L2HGDHQ9H9P8 463 aa12.04□□□□□ -0.48
SKA1-201ENST00000285116 AKAP11Q9UKA4 1901 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 COL22A1Q8NFW1 1626 aaPredicted RBP12.03□□□□□ -0.48
SKA1-201ENST00000285116 GOLIM4O00461 696 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 MYO1BO43795 1136 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 SMIM5Q71RC9 77 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
SKA1-201ENST00000285116 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 ANKRD36CQ5JPF3 1778 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 BECN2A8MW95 431 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 ST7Q9NRC1 585 aa12.03□□□□□ -0.48
SKA1-201ENST00000285116 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
SKA1-201ENST00000285116 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.48
SKA1-201ENST00000285116 MB21D2Q8IYB1 491 aaPredicted RBP12.02□□□□□ -0.48
SKA1-201ENST00000285116 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.48
SKA1-201ENST00000285116 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 IKBKBO14920 756 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 NBPF14Q5TI25 921 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
SKA1-201ENST00000285116 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 NBPF15Q8N660 670 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 PLA2G12BQ9BX93 195 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.49
SKA1-201ENST00000285116 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 FOXP2O15409 715 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 CHGBP05060 677 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 IFIT1P09914 478 aaKnown RBP12.01□□□□□ -0.49
SKA1-201ENST00000285116 CAPN2P17655 700 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 ME1P48163 572 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 ELOA2Q8IYF1 753 aaPredicted RBP12.01□□□□□ -0.49
SKA1-201ENST00000285116 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 MYH3P11055 1940 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 MAP3K15Q6ZN16 1313 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 LRP6O75581 1613 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 M0R2C6 588 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 TRIM28Q13263 835 aaKnown RBP12.01□□□□□ -0.49
SKA1-201ENST00000285116 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
SKA1-201ENST00000285116 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
SKA1-201ENST00000285116 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.01□□□□□ -0.49
SKA1-201ENST00000285116 AKAP2Q9Y2D5 859 aa12.01□□□□□ -0.49
SKA1-201ENST00000285116 ATP5J2-PTCD1G3V325 749 aa12□□□□□ -0.49
SKA1-201ENST00000285116 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
SKA1-201ENST00000285116 LRP5O75197 1615 aa12□□□□□ -0.49
SKA1-201ENST00000285116 CMA1P23946 247 aa12□□□□□ -0.49
SKA1-201ENST00000285116 HNRNPH2P55795 449 aaKnown RBP12□□□□□ -0.49
SKA1-201ENST00000285116 CABP4P57796 275 aa12□□□□□ -0.49
SKA1-201ENST00000285116 NLRP12P59046 1061 aa12□□□□□ -0.49
SKA1-201ENST00000285116 DOCK2Q92608 1830 aa12□□□□□ -0.49
SKA1-201ENST00000285116 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
SKA1-201ENST00000285116 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
SKA1-201ENST00000285116 A0A1B0GUL7 405 aa12□□□□□ -0.49
SKA1-201ENST00000285116 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
SKA1-201ENST00000285116 ERCC6LQ2NKX8 1250 aa12□□□□□ -0.49
SKA1-201ENST00000285116 TEX35Q5T0J7 233 aa12□□□□□ -0.49
SKA1-201ENST00000285116 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
SKA1-201ENST00000285116 CHD4Q14839 1912 aa12□□□□□ -0.49
SKA1-201ENST00000285116 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
SKA1-201ENST00000285116 CLCN6P51797 869 aa12□□□□□ -0.49
SKA1-201ENST00000285116 CCDC93Q567U6 631 aa12□□□□□ -0.49
SKA1-201ENST00000285116 MYSM1Q5VVJ2 828 aa12□□□□□ -0.49
SKA1-201ENST00000285116 AOPEPQ8N6M6 819 aa12□□□□□ -0.49
SKA1-201ENST00000285116 ARGLU1Q9NWB6 273 aaPredicted RBP12□□□□□ -0.49
SKA1-201ENST00000285116 NID2Q14112 1375 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 TOGARAM1Q9Y4F4 1720 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 TPM4P67936 248 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 CCT2P78371 535 aaKnown RBP11.99□□□□□ -0.49
SKA1-201ENST00000285116 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
SKA1-201ENST00000285116 APPBP2Q92624 585 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 OSBP2Q969R2 916 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 NCOA5Q9HCD5 579 aaKnown RBP11.99□□□□□ -0.49
SKA1-201ENST00000285116 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 ZMYM6O95789 1325 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 NPHP1O15259 732 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 SPTLC2O15270 562 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 CCP110O43303 1012 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 NDUFA8P51970 172 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 C8orf76Q96K31 380 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 TUBE1Q9UJT0 475 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 ABCA3Q99758 1704 aa11.99□□□□□ -0.49
SKA1-201ENST00000285116 PPP6R2O75170 966 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 PLA2G4AP47712 749 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 TIMM10P62072 90 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms