RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 GPR101Q96P66 508 aaPredicted RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 FBRSQ9HAH7 460 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 AS3MTQ9HBK9 375 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 ADAMTS1Q9UHI8 967 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 SOGA1O94964 1423 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 DYTNA2CJ06 578 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 AKAP10O43572 662 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 RAB27AP51159 221 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 CC2D1AQ6P1N0 951 aaPredicted RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 POTEDQ86YR6 584 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 SLC7A3Q8WY07 619 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 TMEM74Q96NL1 305 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 ARNT2Q9HBZ2 717 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 SNAPC4Q5SXM2 1469 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 TMEM229AB2RXF0 380 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 SLC26A4O43511 780 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 SNUPNO95149 360 aaKnown RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 EXOSC10Q01780 885 aaKnown RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 NEUROD1Q13562 356 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 C6orf15Q6UXA7 325 aaPredicted RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 C11orf74Q86VG3 221 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 OXCT2Q9BYC2 517 aaPredicted RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 TNIKQ9UKE5 1360 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 CCDC163A0A0D9SF12 145 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 PSAPP07602 524 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 MLC1Q15049 377 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 MAP9Q49MG5 647 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 JAMLQ86YT9 394 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 RASGRP4Q8TDF6 673 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 STAG1Q8WVM7 1258 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 TOMM22Q9NS69 142 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 GNL3LQ9NVN8 582 aaKnown RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 PCDH10Q9P2E7 1040 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 KIAA0556O60303 1618 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 NOP56O00567 594 aaKnown RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 FLT3P36888 993 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 GNALP38405 381 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 SCNN1BP51168 640 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 DDX54Q8TDD1 881 aaKnown RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 SCYL1Q96KG9 808 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 NOB1Q9ULX3 412 aaKnown RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 PTCH2Q9Y6C5 1203 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 MYL3P08590 195 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 RAG1P15918 1043 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 PMLP29590 882 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 PLA2G4AP47712 749 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 TCIRG1Q13488 830 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 GJD3Q8N144 294 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 MAGEB10Q96LZ2 347 aaPredicted RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 FAM50BQ9Y247 325 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 GRM1Q13255 1194 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 GNPTABQ3T906 1256 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 LAPTM4BQ86VI4 370 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 CCDC89Q8N998 374 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 C2orf49Q9BVC5 232 aaPredicted RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 DAAM1Q9Y4D1 1078 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 MAP4K5Q9Y4K4 846 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 SLC4A7Q9Y6M7 1214 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 MICAL2O94851 1124 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 ARSDP51689 593 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 AHI1Q8N157 1196 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 ASAP3Q8TDY4 903 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 IL17RAQ96F46 866 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 TTC1Q99614 292 aa3.36□□□□□ -1.87
CHD1-201ENST00000284049 ABI2Q9NYB9 513 aaPredicted RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 ZNF608Q9ULD9 1512 aaPredicted RBP3.36□□□□□ -1.87
CHD1-201ENST00000284049 KPNA6O60684 536 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 PPFIA4O75335 1185 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 CAMK2GQ13555 558 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 PTPN21Q16825 1174 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 TKFCQ3LXA3 575 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 GPR153Q6NV75 609 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 SAP30BPQ9UHR5 308 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 FBXO2Q9UK22 296 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 GTF2A1LQ9UNN4 478 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 CHD1O14646 1710 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 ABCC2Q92887 1545 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 ESPNB1AK53 854 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 F5H423 210 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 UPP2O95045 317 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 GNRH1P01148 92 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 RASA3Q14644 834 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 GFOD2Q3B7J2 385 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 C4orf46Q504U0 113 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 LDLRAD1Q5T700 205 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 MAATS1Q7Z4T9 603 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 PRDM11Q9NQV5 511 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 FAM86C1Q9NVL1 165 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 FOXD3Q9UJU5 478 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 LRFN2Q9ULH4 789 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 GOLGA3Q08378 1498 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 ARHGAP33O14559 1287 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 ADH1BP00325 375 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 ZSCAN20P17040 1043 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 ZNF157P51786 506 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 NEK2P51955 445 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 SMTNP53814 917 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 CABP4P57796 275 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 RELBQ01201 579 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 EEPD1Q7L9B9 569 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms