RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KLF18A0A0U1RQI7 1052 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 APBA3O96018 575 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 TPTE2Q6XPS3 522 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 CCDC144CPQ8IYA2 1237 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 ZNF512BQ96KM6 892 aaPredicted RBP21.15■□□□□ 0.98
CAPN1-201ENST00000279247 PDIA3P30101 505 aaKnown RBP21.15■□□□□ 0.98
CAPN1-201ENST00000279247 TRAPPC3LQ5T215 181 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 STRBPQ96SI9 672 aaKnown RBP21.15■□□□□ 0.98
CAPN1-201ENST00000279247 NAPBQ9H115 298 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 RBSNQ9H1K0 784 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 TCRBV5S4A2TA0A5A2 114 aa21.14■□□□□ 0.98
CAPN1-201ENST00000279247 MCM5P33992 734 aa21.14■□□□□ 0.98
CAPN1-201ENST00000279247 CHAF1AQ13111 956 aaPredicted RBP21.14■□□□□ 0.98
CAPN1-201ENST00000279247 LCORLQ8N3X6 602 aa21.14■□□□□ 0.98
CAPN1-201ENST00000279247 GOLGA8BA8MQT2 603 aa21.14■□□□□ 0.97
CAPN1-201ENST00000279247 PFKFB2O60825 505 aa21.14■□□□□ 0.97
CAPN1-201ENST00000279247 CTDNEP1O95476 244 aa21.14■□□□□ 0.97
CAPN1-201ENST00000279247 NSUN7Q8NE18 718 aaKnown RBP21.14■□□□□ 0.97
CAPN1-201ENST00000279247 NBPF3Q9H094 633 aa21.14■□□□□ 0.97
CAPN1-201ENST00000279247 MYH7P12883 1935 aa21.14■□□□□ 0.97
CAPN1-201ENST00000279247 ANTXR2P58335 489 aa21.13■□□□□ 0.97
CAPN1-201ENST00000279247 RPS8P62241 208 aaKnown RBP21.13■□□□□ 0.97
CAPN1-201ENST00000279247 OTUD7BQ6GQQ9 843 aa21.13■□□□□ 0.97
CAPN1-201ENST00000279247 SF3B3Q15393 1217 aaKnown RBP21.13■□□□□ 0.97
CAPN1-201ENST00000279247 COL5A3P25940 1745 aaPredicted RBP21.13■□□□□ 0.97
CAPN1-201ENST00000279247 CYP7A1P22680 504 aa21.13■□□□□ 0.97
CAPN1-201ENST00000279247 TDO2P48775 406 aa21.13■□□□□ 0.97
CAPN1-201ENST00000279247 SLC4A4Q9Y6R1 1079 aa21.13■□□□□ 0.97
CAPN1-201ENST00000279247 SBF2Q86WG5 1849 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 ZNF445P59923 1031 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 TXNRD1Q16881 649 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 CAVIN4Q5BKX8 364 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 SDR42E1Q8WUS8 393 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 NYXQ9GZU5 481 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 EPB41L4AQ9HCS5 686 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-201ENST00000279247 BSDC1Q9NW68 430 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-201ENST00000279247 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 KRT85P78386 507 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
CAPN1-201ENST00000279247 TTC6Q86TZ1 520 aa21.12■□□□□ 0.97
CAPN1-201ENST00000279247 MB21D2Q8IYB1 491 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-201ENST00000279247 ADGRA1Q86SQ6 560 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 IFNL3Q8IZI9 196 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 SENP2Q9HC62 589 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 GJB4Q9NTQ9 266 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 CYB5R4Q7L1T6 521 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 ZKSCAN3Q9BRR0 538 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 MYL10Q9BUA6 226 aa21.11■□□□□ 0.97
CAPN1-201ENST00000279247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-201ENST00000279247 SMIM22K7EJ46 135 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 MINDY4BA8MYZ0 360 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 UBE2HP62256 183 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 GPR101Q96P66 508 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-201ENST00000279247 FTOQ9C0B1 505 aaKnown RBP eCLIP21.1■□□□□ 0.97
CAPN1-201ENST00000279247 NEDD4P46934 1319 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 CPLX1O14810 134 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 NFIXQ14938 502 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 MICU3Q86XE3 530 aa21.1■□□□□ 0.97
CAPN1-201ENST00000279247 SYAP1Q96A49 352 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-201ENST00000279247 GNL3LQ9NVN8 582 aaKnown RBP21.1■□□□□ 0.97
CAPN1-201ENST00000279247 SLC4A8Q2Y0W8 1093 aa21.09■□□□□ 0.97
CAPN1-201ENST00000279247 FAM84BQ96KN1 310 aaPredicted RBP21.09■□□□□ 0.97
CAPN1-201ENST00000279247 NFXL1Q6ZNB6 911 aa21.09■□□□□ 0.97
CAPN1-201ENST00000279247 TXNRD3Q86VQ6 643 aa21.09■□□□□ 0.97
CAPN1-201ENST00000279247 TICAM2Q86XR7 235 aa21.09■□□□□ 0.97
CAPN1-201ENST00000279247 SPATA32Q96LK8 384 aa21.09■□□□□ 0.97
CAPN1-201ENST00000279247 GOLGA6L4A6NEF3 574 aa21.08■□□□□ 0.97
CAPN1-201ENST00000279247 LRSAM1Q6UWE0 723 aa21.08■□□□□ 0.97
CAPN1-201ENST00000279247 ANKIB1Q9P2G1 1089 aa21.08■□□□□ 0.97
CAPN1-201ENST00000279247 ISY1Q9ULR0 285 aaKnown RBP21.08■□□□□ 0.97
CAPN1-201ENST00000279247 PATL2C9JE40 543 aaKnown RBP21.08■□□□□ 0.96
CAPN1-201ENST00000279247 RTL9Q8NET4 1388 aa21.08■□□□□ 0.96
CAPN1-201ENST00000279247 LRP5O75197 1615 aa21.08■□□□□ 0.96
CAPN1-201ENST00000279247 RREB1Q92766 1687 aa21.08■□□□□ 0.96
CAPN1-201ENST00000279247 DYNLL1P63167 89 aaKnown RBP21.07■□□□□ 0.96
CAPN1-201ENST00000279247 AGXT2Q9BYV1 514 aa21.07■□□□□ 0.96
CAPN1-201ENST00000279247 GSG1L2A8MUP6 293 aa21.07■□□□□ 0.96
CAPN1-201ENST00000279247 UBE4AQ14139 1066 aa21.07■□□□□ 0.96
CAPN1-201ENST00000279247 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
CAPN1-201ENST00000279247 CNBD1Q8NA66 436 aa21.07■□□□□ 0.96
CAPN1-201ENST00000279247 ANP32BQ92688 251 aaKnown RBP21.07■□□□□ 0.96
CAPN1-201ENST00000279247 CAMK4Q16566 473 aa21.07■□□□□ 0.96
CAPN1-201ENST00000279247 ZNF827Q17R98 1081 aa21.06■□□□□ 0.96
CAPN1-201ENST00000279247 SMARCC2Q8TAQ2 1214 aa21.06■□□□□ 0.96
CAPN1-201ENST00000279247 ZNF274Q96GC6 653 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-201ENST00000279247 ADD1P35611 737 aaKnown RBP21.06■□□□□ 0.96
CAPN1-201ENST00000279247 CYP2D7A0A087X1C5 515 aa21.05■□□□□ 0.96
CAPN1-201ENST00000279247 SLC10A5Q5PT55 438 aa21.05■□□□□ 0.96
CAPN1-201ENST00000279247 CCDC82Q8N4S0 544 aa21.05■□□□□ 0.96
CAPN1-201ENST00000279247 TMEM87AQ8NBN3 555 aa21.05■□□□□ 0.96
CAPN1-201ENST00000279247 BCORQ6W2J9 1755 aa21.05■□□□□ 0.96
CAPN1-201ENST00000279247 TACC3Q9Y6A5 838 aa21.05■□□□□ 0.96
CAPN1-201ENST00000279247 CSPP1Q1MSJ5 1256 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 NACAP1Q9BZK3 213 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 ORC3Q9UBD5 711 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-201ENST00000279247 HPS5Q9UPZ3 1129 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 HMGN5P82970 282 aaKnown RBP21.04■□□□□ 0.96
CAPN1-201ENST00000279247 TMEM67Q5HYA8 995 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 TRIM44Q96DX7 344 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-201ENST00000279247 COL1A1P02452 1464 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms