RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CLIC6Q96NY7 704 aa21.57■■□□□ 1.04
SSC4D-201ENST00000275560 DENND2AQ9ULE3 1009 aa21.57■■□□□ 1.04
SSC4D-201ENST00000275560 TEX35Q5T0J7 233 aa21.57■■□□□ 1.04
SSC4D-201ENST00000275560 HELLSQ9NRZ9 838 aa21.57■■□□□ 1.04
SSC4D-201ENST00000275560 FANCLQ9NW38 375 aa21.57■■□□□ 1.04
SSC4D-201ENST00000275560 ARGLU1Q9NWB6 273 aaPredicted RBP21.57■■□□□ 1.04
SSC4D-201ENST00000275560 HPS5Q9UPZ3 1129 aa21.57■■□□□ 1.04
SSC4D-201ENST00000275560 C5P01031 1676 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 YEATS4O95619 227 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 TBC1D8O95759 1140 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 OAS2P29728 719 aaKnown RBP21.56■■□□□ 1.04
SSC4D-201ENST00000275560 LRRC24Q50LG9 513 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 PDILTQ8N807 584 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 ZSWIM4Q9H7M6 989 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 INTS13Q9NVM9 706 aa21.56■■□□□ 1.04
SSC4D-201ENST00000275560 PRC1O43663 620 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 SYKP43405 635 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 KCNJ6P48051 423 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 FKBP4Q02790 459 aaKnown RBP eCLIP21.55■■□□□ 1.04
SSC4D-201ENST00000275560 RABL6Q3YEC7 729 aaPredicted RBP21.55■■□□□ 1.04
SSC4D-201ENST00000275560 ATG9AQ7Z3C6 839 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 NKX2-3Q8TAU0 364 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 RFX7Q2KHR2 1363 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 FOXN1O15353 648 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 GCP02774 474 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 CDC27P30260 824 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 KIF23Q02241 960 aaPredicted RBP21.55■■□□□ 1.04
SSC4D-201ENST00000275560 PPP2R2CQ9Y2T4 447 aa21.55■■□□□ 1.04
SSC4D-201ENST00000275560 CPLX1O14810 134 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 FOXP2O15409 715 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 TOP1P11387 765 aaKnown RBP21.54■■□□□ 1.04
SSC4D-201ENST00000275560 GNG11P61952 73 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 SPECC1Q5M775 1068 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 TOGARAM2Q6ZUX3 1019 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 IFIT1P09914 478 aaKnown RBP21.54■■□□□ 1.04
SSC4D-201ENST00000275560 CMA1P23946 247 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 ADKP55263 362 aaKnown RBP21.54■■□□□ 1.04
SSC4D-201ENST00000275560 PDE4BQ07343 736 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 LRRFIP1Q32MZ4 808 aaKnown RBP21.54■■□□□ 1.04
SSC4D-201ENST00000275560 SHC4Q6S5L8 630 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 TMEM139Q8IV31 216 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 DESI2Q9BSY9 194 aa21.54■■□□□ 1.04
SSC4D-201ENST00000275560 TULP2O00295 520 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 RNF113AO15541 343 aaKnown RBP21.53■■□□□ 1.04
SSC4D-201ENST00000275560 MYL5Q02045 173 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 RAD51AP2Q09MP3 1159 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 LRP10Q7Z4F1 713 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 VSTM4Q8IW00 320 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 STK11IPQ8N1F8 1099 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 EFCAB8A8MWE9 144 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 WASHC4Q2M389 1173 aa21.53■■□□□ 1.04
SSC4D-201ENST00000275560 CC2D1AQ6P1N0 951 aaPredicted RBP21.53■■□□□ 1.04
SSC4D-201ENST00000275560 FOXP4Q8IVH2 680 aaPredicted RBP21.53■■□□□ 1.04
SSC4D-201ENST00000275560 ZFP91Q96JP5 570 aaPredicted RBP21.53■■□□□ 1.04
SSC4D-201ENST00000275560 IRX2Q9BZI1 471 aaPredicted RBP21.53■■□□□ 1.04
SSC4D-201ENST00000275560 UBE2Q2LH0YL09 131 aa21.52■■□□□ 1.04
SSC4D-201ENST00000275560 IKBKBO14920 756 aa21.52■■□□□ 1.04
SSC4D-201ENST00000275560 ANTXR2P58335 489 aa21.52■■□□□ 1.04
SSC4D-201ENST00000275560 KARSQ15046 597 aaKnown RBP21.52■■□□□ 1.04
SSC4D-201ENST00000275560 KRBA2Q6ZNG9 492 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 KCNH5Q8NCM2 988 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
SSC4D-201ENST00000275560 AFDNP55196 1824 aaKnown RBP21.51■■□□□ 1.03
SSC4D-201ENST00000275560 BMP6P22004 513 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 SMC1AQ14683 1233 aaKnown RBP21.51■■□□□ 1.03
SSC4D-201ENST00000275560 ARHGEF25Q86VW2 580 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 USP54Q70EL1 1684 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 FGAP02671 866 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 CASP7P55210 303 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 LONRF3Q496Y0 759 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 METTL16Q86W50 562 aaKnown RBP21.51■■□□□ 1.03
SSC4D-201ENST00000275560 SLC52A2Q9HAB3 445 aa21.51■■□□□ 1.03
SSC4D-201ENST00000275560 CASQ1P31415 396 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 FOXO4P98177 505 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 CCDC158Q5M9N0 1113 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 PHKBQ93100 1093 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 TUBE1Q9UJT0 475 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 A0A0U1RQJ8 604 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 PPP2R3AQ06190 1150 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 MTF1Q14872 753 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 SLC39A14Q15043 492 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 ZNF827Q17R98 1081 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 BRAPQ7Z569 592 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 ATRIPQ8WXE1 791 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 PARD6BQ9BYG5 372 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 TRIM34Q9BYJ4 488 aa21.5■■□□□ 1.03
SSC4D-201ENST00000275560 A0A1B0GUL7 405 aa21.49■■□□□ 1.03
SSC4D-201ENST00000275560 PI16Q6UXB8 463 aa21.49■■□□□ 1.03
SSC4D-201ENST00000275560 TRMT44Q8IYL2 757 aaKnown RBP21.49■■□□□ 1.03
SSC4D-201ENST00000275560 DHX58Q96C10 678 aa21.49■■□□□ 1.03
SSC4D-201ENST00000275560 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
SSC4D-201ENST00000275560 VPS37DQ86XT2 251 aa21.49■■□□□ 1.03
SSC4D-201ENST00000275560 PCDHA5Q9Y5H7 936 aa21.49■■□□□ 1.03
SSC4D-201ENST00000275560 CCP110O43303 1012 aa21.48■■□□□ 1.03
SSC4D-201ENST00000275560 BAG1Q99933 345 aaPredicted RBP21.48■■□□□ 1.03
SSC4D-201ENST00000275560 UBXN6Q9BZV1 441 aa21.48■■□□□ 1.03
SSC4D-201ENST00000275560 SENP2Q9HC62 589 aa21.48■■□□□ 1.03
SSC4D-201ENST00000275560 ADORA1P30542 326 aa21.48■■□□□ 1.03
SSC4D-201ENST00000275560 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
SSC4D-201ENST00000275560 CCDC85AQ96PX6 553 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 288.6 ms