RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 GTF2IP78347 998 aa13.27□□□□□ -0.29
LRTM1-201ENST00000273286 UBAP2LQ14157 1087 aaKnown RBP13.27□□□□□ -0.29
LRTM1-201ENST00000273286 TMEM151AQ8N4L1 468 aa13.27□□□□□ -0.29
LRTM1-201ENST00000273286 GOLGB1Q14789 3259 aaKnown RBP13.27□□□□□ -0.29
LRTM1-201ENST00000273286 GDF11O95390 407 aa13.26□□□□□ -0.29
LRTM1-201ENST00000273286 BCRP11274 1271 aa13.26□□□□□ -0.29
LRTM1-201ENST00000273286 DEPDC4Q8N2C3 294 aa13.26□□□□□ -0.29
LRTM1-201ENST00000273286 ITGB4P16144 1822 aa13.26□□□□□ -0.29
LRTM1-201ENST00000273286 USP17L5A8MUK1 530 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 LZTS3O60299 673 aaPredicted RBP13.25□□□□□ -0.29
LRTM1-201ENST00000273286 SSFA2P28290 1259 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 IRS1P35568 1242 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 SCARF2Q96GP6 870 aaPredicted RBP13.25□□□□□ -0.29
LRTM1-201ENST00000273286 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 TMOD3Q9NYL9 352 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
LRTM1-201ENST00000273286 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
LRTM1-201ENST00000273286 A6NJY4 79 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 MAP2K3P46734 347 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 PIGBQ92521 554 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 AIDAQ96BJ3 306 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 TOGARAM1Q9Y4F4 1720 aa13.24□□□□□ -0.29
LRTM1-201ENST00000273286 ATP4AP20648 1035 aa13.23□□□□□ -0.29
LRTM1-201ENST00000273286 MTFR1Q15390 333 aa13.23□□□□□ -0.29
LRTM1-201ENST00000273286 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
LRTM1-201ENST00000273286 USP3Q9Y6I4 520 aa13.23□□□□□ -0.29
LRTM1-201ENST00000273286 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
LRTM1-201ENST00000273286 PHKG2P15735 406 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 SIK1P57059 783 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
LRTM1-201ENST00000273286 ATXN7L1Q9ULK2 861 aaPredicted RBP13.22□□□□□ -0.29
LRTM1-201ENST00000273286 IQSEC3Q9UPP2 1182 aaPredicted RBP13.22□□□□□ -0.29
LRTM1-201ENST00000273286 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
LRTM1-201ENST00000273286 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
LRTM1-201ENST00000273286 TMEM132AQ24JP5 1023 aa13.21□□□□□ -0.3
LRTM1-201ENST00000273286 ZNF295-AS1Q8N0V1 137 aa13.21□□□□□ -0.3
LRTM1-201ENST00000273286 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 ERVV-2B6SEH9 535 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 CDK2AP1O14519 115 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 BACH1O14867 736 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRTM1-201ENST00000273286 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
LRTM1-201ENST00000273286 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRTM1-201ENST00000273286 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 ZNF358Q9NW07 568 aa13.2□□□□□ -0.3
LRTM1-201ENST00000273286 BNIP3LO60238 219 aa13.19□□□□□ -0.3
LRTM1-201ENST00000273286 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
LRTM1-201ENST00000273286 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
LRTM1-201ENST00000273286 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
LRTM1-201ENST00000273286 OIP5O43482 229 aa13.18□□□□□ -0.3
LRTM1-201ENST00000273286 FGFR3P22607 806 aa13.18□□□□□ -0.3
LRTM1-201ENST00000273286 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
LRTM1-201ENST00000273286 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
LRTM1-201ENST00000273286 FIGNL1Q6PIW4 674 aa13.18□□□□□ -0.3
LRTM1-201ENST00000273286 KLRG1Q96E93 195 aa13.18□□□□□ -0.3
LRTM1-201ENST00000273286 UCN2Q96RP3 112 aa13.18□□□□□ -0.3
LRTM1-201ENST00000273286 DNAAF2Q9NVR5 837 aaKnown RBP13.18□□□□□ -0.3
LRTM1-201ENST00000273286 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 LINC00116Q8NCU8 138 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
LRTM1-201ENST00000273286 BMP4P12644 408 aa13.16□□□□□ -0.3
LRTM1-201ENST00000273286 TNNT2P45379 298 aaPredicted RBP13.16□□□□□ -0.3
LRTM1-201ENST00000273286 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
LRTM1-201ENST00000273286 TRIM50Q86XT4 487 aa13.16□□□□□ -0.3
LRTM1-201ENST00000273286 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
LRTM1-201ENST00000273286 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
LRTM1-201ENST00000273286 ZDHHC3Q9NYG2 299 aa13.16□□□□□ -0.3
LRTM1-201ENST00000273286 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
LRTM1-201ENST00000273286 KDRP35968 1356 aa13.16□□□□□ -0.3
LRTM1-201ENST00000273286 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
LRTM1-201ENST00000273286 NLRP8Q86W28 1048 aa13.15□□□□□ -0.3
LRTM1-201ENST00000273286 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
LRTM1-201ENST00000273286 ZCCHC2Q9C0B9 1178 aaKnown RBP13.15□□□□□ -0.3
LRTM1-201ENST00000273286 PANK3Q9H999 370 aa13.15□□□□□ -0.3
LRTM1-201ENST00000273286 SCHIP1Q9P0W5 487 aaPredicted RBP13.15□□□□□ -0.3
LRTM1-201ENST00000273286 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
LRTM1-201ENST00000273286 A0A1W2PNR3 127 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 HSPA5P11021 654 aaKnown RBP13.14□□□□□ -0.31
LRTM1-201ENST00000273286 ITPK1Q13572 414 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 GDF2Q9UK05 429 aaPredicted RBP13.14□□□□□ -0.31
LRTM1-201ENST00000273286 PCDHGC4Q9Y5F7 938 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms