RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MIGA1Q8NAN2 632 aa13.72□□□□□ -0.21
SCAF11-201ENST00000266589 GPR101Q96P66 508 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-201ENST00000266589 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
SCAF11-201ENST00000266589 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 PPEF1O14829 653 aaPredicted RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 SRGNP10124 158 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 FGD1P98174 961 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 ST3GAL1Q11201 340 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 ZBTB22O15209 634 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 NPR1P16066 1061 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 GNAT2P19087 354 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 PDE6BP35913 854 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 EXOSC10Q01780 885 aaKnown RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 NAA16Q6N069 864 aaPredicted RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 C15orf52Q6ZUT6 534 aaKnown RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 ZNF804AQ7Z570 1209 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 EPB41L4AQ9HCS5 686 aaPredicted RBP13.71□□□□□ -0.21
SCAF11-201ENST00000266589 SMC3Q9UQE7 1217 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 ZDHHC9Q9Y397 364 aa13.71□□□□□ -0.21
SCAF11-201ENST00000266589 CHD4Q14839 1912 aa13.71□□□□□ -0.22
SCAF11-201ENST00000266589 ZMYM6O95789 1325 aa13.71□□□□□ -0.22
SCAF11-201ENST00000266589 ALX1Q15699 326 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 BRF1Q92994 677 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 NAPBQ9H115 298 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 JAG2Q9Y219 1238 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 SLC4A4Q9Y6R1 1079 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 MAGEB6P1A0A0J9YX57 407 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 GSG1L2A8MUP6 293 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 PRKAB2O43741 272 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 BAG6P46379 1132 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 NCOA7Q8NI08 942 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 ZNF384Q8TF68 577 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
SCAF11-201ENST00000266589 KIAA1551Q9HCM1 1747 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 MECOMQ03112 1051 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 STK3Q13188 491 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
SCAF11-201ENST00000266589 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 SP8Q8IXZ3 490 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
SCAF11-201ENST00000266589 NSUN4Q96CB9 384 aaKnown RBP13.69□□□□□ -0.22
SCAF11-201ENST00000266589 NACAP1Q9BZK3 213 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
SCAF11-201ENST00000266589 BRD1O95696 1058 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 PRDX5P30044 214 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 TDO2P48775 406 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-201ENST00000266589 CLEC17AQ6ZS10 378 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-201ENST00000266589 TBC1D16Q8TBP0 767 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-201ENST00000266589 AGXT2Q9BYV1 514 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 POLLQ9UGP5 575 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
SCAF11-201ENST00000266589 GJB2P29033 226 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
SCAF11-201ENST00000266589 SALL1Q9NSC2 1324 aa13.68□□□□□ -0.22
SCAF11-201ENST00000266589 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 DTNBO60941 627 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 ALDH1B1P30837 517 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 MCM5P33992 734 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 TRDNQ13061 729 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
SCAF11-201ENST00000266589 WDR66Q8TBY9 1149 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 PRC1O43663 620 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 DYNLL1P63167 89 aaKnown RBP13.67□□□□□ -0.22
SCAF11-201ENST00000266589 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 DZIP1Q86YF9 867 aaKnown RBP13.67□□□□□ -0.22
SCAF11-201ENST00000266589 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
SCAF11-201ENST00000266589 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
SCAF11-201ENST00000266589 IL1R1P14778 569 aa13.66□□□□□ -0.22
SCAF11-201ENST00000266589 ANTXR2P58335 489 aa13.66□□□□□ -0.22
SCAF11-201ENST00000266589 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
SCAF11-201ENST00000266589 FBXL16Q8N461 479 aa13.66□□□□□ -0.22
SCAF11-201ENST00000266589 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.222e-9■□□□□ 9
SCAF11-201ENST00000266589 NEDD4P46934 1319 aa13.66□□□□□ -0.22
SCAF11-201ENST00000266589 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.22
SCAF11-201ENST00000266589 SYT1P21579 422 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-201ENST00000266589 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 BAZ2AQ9UIF9 1905 aaKnown RBP13.65□□□□□ -0.22
SCAF11-201ENST00000266589 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 STX6O43752 255 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 PFKFB2O60825 505 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms