RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 FAM160A1Q05DH4 1040 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
TCTN3-201ENST00000265993 FBXO18Q8NFZ0 1043 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 ZNF396Q96N95 335 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-201ENST00000265993 SPTLC3Q9NUV7 552 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-201ENST00000265993 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-201ENST00000265993 PDE6AP16499 860 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 STK38Q15208 465 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 PLA2G4DQ86XP0 818 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 LINC00301Q8NCQ3 95 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-201ENST00000265993 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
TCTN3-201ENST00000265993 CLIP2Q9UDT6 1046 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 NEDD4P46934 1319 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 CDHR2Q9BYE9 1310 aa12.69□□□□□ -0.38
TCTN3-201ENST00000265993 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 BIN1O00499 593 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 CDC27P30260 824 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 BAZ2BQ9UIF8 2168 aaKnown RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 WTIPA6NIX2 430 aaPredicted RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 PDE8AO60658 829 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 TRDNQ13061 729 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 SUSD4Q5VX71 490 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 ISM2Q6H9L7 571 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 EXOC5O00471 708 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 PRKAB2O43741 272 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 MYSM1Q5VVJ2 828 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 MAGEB6Q8N7X4 407 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 CACTINQ8WUQ7 758 aaKnown RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 C16orf45Q96MC5 204 aaPredicted RBP12.68□□□□□ -0.38
TCTN3-201ENST00000265993 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
TCTN3-201ENST00000265993 LRP6O75581 1613 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 MYRIPQ8NFW9 859 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 MRPS27Q92552 414 aaKnown RBP12.67□□□□□ -0.38
TCTN3-201ENST00000265993 AIDAQ96BJ3 306 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 ARMT1Q9H993 441 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
TCTN3-201ENST00000265993 ANGEL1Q9UNK9 670 aaKnown RBP12.67□□□□□ -0.38
TCTN3-201ENST00000265993 BECN2A8MW95 431 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 SMIM22K7EJ46 135 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 STX1AQ16623 288 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 DHX40Q8IX18 779 aaKnown RBP12.67□□□□□ -0.38
TCTN3-201ENST00000265993 FBXL16Q8N461 479 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 CCDC82Q8N4S0 544 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 AOPEPQ8N6M6 819 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
TCTN3-201ENST00000265993 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 TAF1P21675 1872 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 TCRBV5S4A2TA0A5A2 114 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 MBD4O95243 580 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 METAP2P50579 478 aaKnown RBP eCLIP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 BCAMP50895 628 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 APOA5Q6Q788 366 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 FILIP1Q7Z7B0 1213 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 SPTLC2O15270 562 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 DHX16O60231 1041 aaKnown RBP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 PUM3Q15397 648 aaKnown RBP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 ADALQ6DHV7 355 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 CMTR1Q8N1G2 835 aaKnown RBP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 MIGA1Q8NAN2 632 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 SPATA5Q8NB90 893 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
TCTN3-201ENST00000265993 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 MROH7-TTC4A0A0A0MT08 1334 aa12.66□□□□□ -0.38
TCTN3-201ENST00000265993 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
TCTN3-201ENST00000265993 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
TCTN3-201ENST00000265993 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
TCTN3-201ENST00000265993 KCNQ4P56696 695 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 MPHOSPH8Q99549 860 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 EP400Q96L91 3159 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
TCTN3-201ENST00000265993 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 VPS37DQ86XT2 251 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 ZNF34Q8IZ26 560 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
TCTN3-201ENST00000265993 CHD4Q14839 1912 aa12.64□□□□□ -0.39
TCTN3-201ENST00000265993 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms