RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 CDC27P30260 824 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 UTP14CQ5TAP6 766 aaKnown RBP19.21■□□□□ 0.67
ZNF541-201ENST00000263351 GPAA1O43292 621 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
ZNF541-201ENST00000263351 MICU3Q86XE3 530 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 CEP126Q9P2H0 1117 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 RFX7Q2KHR2 1363 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 CCDC82Q8N4S0 544 aa19.2■□□□□ 0.66
ZNF541-201ENST00000263351 OGFRQ9NZT2 677 aa19.2■□□□□ 0.66
ZNF541-201ENST00000263351 CMTR1Q8N1G2 835 aaKnown RBP19.2■□□□□ 0.66
ZNF541-201ENST00000263351 KLHL34Q8N239 644 aa19.2■□□□□ 0.66
ZNF541-201ENST00000263351 GRIN1Q05586 938 aa19.19■□□□□ 0.66
ZNF541-201ENST00000263351 IMMTQ16891 758 aaKnown RBP19.19■□□□□ 0.66
ZNF541-201ENST00000263351 ANO1Q5XXA6 986 aa19.19■□□□□ 0.66
ZNF541-201ENST00000263351 MCAMP43121 646 aa19.19■□□□□ 0.66
ZNF541-201ENST00000263351 SHC4Q6S5L8 630 aa19.19■□□□□ 0.66
ZNF541-201ENST00000263351 ZNF771Q7L3S4 317 aaPredicted RBP19.19■□□□□ 0.66
ZNF541-201ENST00000263351 TJP1Q07157 1748 aa19.18■□□□□ 0.66
ZNF541-201ENST00000263351 B4E1Z4 1266 aa19.18■□□□□ 0.66
ZNF541-201ENST00000263351 APPP05067 770 aa19.18■□□□□ 0.66
ZNF541-201ENST00000263351 ZRSR1Q15695 479 aaKnown RBP19.18■□□□□ 0.66
ZNF541-201ENST00000263351 HELBQ8NG08 1087 aaPredicted RBP19.18■□□□□ 0.66
ZNF541-201ENST00000263351 CAVIN2O95810 425 aa19.18■□□□□ 0.66
ZNF541-201ENST00000263351 ZNF827Q17R98 1081 aa19.18■□□□□ 0.66
ZNF541-201ENST00000263351 CCDC57Q2TAC2 916 aa19.18■□□□□ 0.66
ZNF541-201ENST00000263351 FOXP4Q8IVH2 680 aaPredicted RBP19.18■□□□□ 0.66
ZNF541-201ENST00000263351 CGNQ9P2M7 1197 aaKnown RBP19.18■□□□□ 0.66
ZNF541-201ENST00000263351 MYO5AQ9Y4I1 1855 aaKnown RBP19.18■□□□□ 0.66
ZNF541-201ENST00000263351 FANCCQ00597 558 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 PDE4BQ07343 736 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 SYNE3Q6ZMZ3 975 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 RALYLQ86SE5 291 aaKnown RBP19.17■□□□□ 0.66
ZNF541-201ENST00000263351 VPS37DQ86XT2 251 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 GRAMD1CQ8IYS0 662 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 OSBPL5Q9H0X9 879 aaPredicted RBP19.17■□□□□ 0.66
ZNF541-201ENST00000263351 TACC3Q9Y6A5 838 aa19.17■□□□□ 0.66
ZNF541-201ENST00000263351 ZNF213O14771 459 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 IDH1O75874 414 aaKnown RBP19.16■□□□□ 0.66
ZNF541-201ENST00000263351 SFPQP23246 707 aaKnown RBP eCLIP19.16■□□□□ 0.66
ZNF541-201ENST00000263351 CCDC158Q5M9N0 1113 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 GTPBP4Q9BZE4 634 aaKnown RBP19.16■□□□□ 0.66
ZNF541-201ENST00000263351 POLR3EQ9NVU0 708 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 A0A1W2PQ27 194 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 A0A1W2PQ64 194 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 A0A1W2PQD8 194 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 NAT10Q9H0A0 1025 aaKnown RBP19.16■□□□□ 0.66
ZNF541-201ENST00000263351 PIH1D3Q9NQM4 214 aaKnown RBP19.16■□□□□ 0.66
ZNF541-201ENST00000263351 DNAI1Q9UI46 699 aa19.16■□□□□ 0.66
ZNF541-201ENST00000263351 RANBP6O60518 1105 aaKnown RBP19.15■□□□□ 0.66
ZNF541-201ENST00000263351 BMP6P22004 513 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 GUCY1A2P33402 732 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 NLRP12P59046 1061 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 KRT40Q6A162 431 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 FEZ1Q99689 392 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 ZKSCAN3Q9BRR0 538 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 SMIM22K7EJ46 135 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 SLU7O95391 586 aaKnown RBP19.15■□□□□ 0.66
ZNF541-201ENST00000263351 SLFN14P0C7P3 912 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 LONRF3Q496Y0 759 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 SLC9C2Q5TAH2 1124 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 NCOA7Q8NI08 942 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
ZNF541-201ENST00000263351 ERICH4A6NGS2 130 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 ATP2B1P20020 1258 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 SYKP43405 635 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 EVCP57679 992 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 HLFQ16534 295 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 HOMER1Q86YM7 354 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 TRMT44Q8IYL2 757 aaKnown RBP19.14■□□□□ 0.65
ZNF541-201ENST00000263351 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.65
ZNF541-201ENST00000263351 GREM2Q9H772 168 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 FANCLQ9NW38 375 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 CTDSPL2Q05D32 466 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 METTL16Q86W50 562 aaKnown RBP19.14■□□□□ 0.65
ZNF541-201ENST00000263351 ZNF397Q8NF99 534 aaPredicted RBP19.14■□□□□ 0.65
ZNF541-201ENST00000263351 INTS13Q9NVM9 706 aa19.14■□□□□ 0.65
ZNF541-201ENST00000263351 NEMFO60524 1076 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 APPBP2Q92624 585 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 GPR108Q9NPR9 543 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
ZNF541-201ENST00000263351 ZBTB22O15209 634 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 YEATS4O95619 227 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 CFAP100Q494V2 611 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 KCNJ14Q9UNX9 436 aa19.13■□□□□ 0.65
ZNF541-201ENST00000263351 SERPINC1P01008 464 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 METAP2P50579 478 aaKnown RBP eCLIP19.12■□□□□ 0.65
ZNF541-201ENST00000263351 SYCP1Q15431 976 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 METTL24Q5JXM2 366 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 ERO1AQ96HE7 468 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 C19orf44Q9H6X5 657 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 SEC31BQ9NQW1 1179 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 STRN4Q9NRL3 753 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 SEC31AO94979 1220 aaKnown RBP19.12■□□□□ 0.65
ZNF541-201ENST00000263351 PRR29P0C7W0 189 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms