RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 CLNS1AP54105 237 aaKnown RBP12.21□□□□□ -0.46
CSNK1A1-201ENST00000261798 SPATA24Q86W54 205 aa12.21□□□□□ -0.46
CSNK1A1-201ENST00000261798 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.46
CSNK1A1-201ENST00000261798 GNAQP50148 359 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 MTX1Q13505 466 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 IFT74Q96LB3 600 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 MTRF1LQ9UGC7 380 aaKnown RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 ABCC4O15439 1325 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 HPDP32754 393 aaPredicted RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 TNIP1Q15025 636 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 CABS1Q96KC9 395 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 MYCBPQ99417 103 aaPredicted RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 TBC1D8BQ0IIM8 1120 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 IFT20Q8IY31 132 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 PAIP2Q9BPZ3 127 aaKnown RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 VPS16Q9H269 839 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 CPSF2Q9P2I0 782 aaKnown RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 IKBKGQ9Y6K9 419 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 CHL1O00533 1208 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 KRT13P13646 458 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 KRT9P35527 623 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 KRT2P35908 639 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
CSNK1A1-201ENST00000261798 RGS12O14924 1447 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 NR1I2O75469 434 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ME3Q16798 604 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 CD2BP2O95400 341 aaKnown RBP12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 PPP1R2P41236 205 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ARID5AQ03989 594 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 RUFY4Q6ZNE9 571 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ZNF521Q96K83 1311 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 CALM1P0DP23 149 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 CALM2P0DP24 149 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 CALM3P0DP25 149 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 WHAMMP3Q1A5X7 153 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 CWF19L2Q2TBE0 894 aaKnown RBP12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 CHAMP1Q96JM3 812 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ADALQ6DHV7 355 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 LRRC45Q96CN5 670 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 MED4Q9NPJ6 270 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 ZNF652Q9Y2D9 606 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 UBLCP1Q8WVY7 318 aaPredicted RBP12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 STIM2Q9P246 746 aa12.19□□□□□ -0.46
CSNK1A1-201ENST00000261798 JAK2O60674 1132 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 CCDC26Q8TAB7 109 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 SLC4A4Q9Y6R1 1079 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 SYNRGQ9UMZ2 1314 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 ZBTB16Q05516 673 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 FBXO31Q5XUX0 539 aaPredicted RBP12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 A2MP01023 1474 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 TBCAO75347 108 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 GPTP24298 496 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 SARNPP82979 210 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 TFCP2Q12800 502 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 CCDC51Q96ER9 411 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
CSNK1A1-201ENST00000261798 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 RABEP2Q9H5N1 569 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 CDC25BP30305 580 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 PPFIBP2Q8ND30 876 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 VAT1LQ9HCJ6 419 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 NUP153P49790 1475 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 FOXO3O43524 673 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 VIMP08670 466 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 PAK2Q13177 524 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 AKAP4Q5JQC9 854 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 PPP2R2CQ9Y2T4 447 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 SMIM23A6NLE4 172 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 CUL4AQ13619 759 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 DTHD1Q6ZMT9 781 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms