RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 KRT2P35908 639 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 SPA17Q15506 151 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 TAF4BQ92750 862 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 PNMA6EA0A0J9YXQ4 647 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 ZBED4O75132 1171 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 ZAP70P43403 619 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 KIAA1328Q86T90 577 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 ZMYM4Q5VZL5 1548 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 ZSCAN22P10073 491 aaPredicted RBP15.91■□□□□ 0.14
CDH1-201ENST00000261769 STAT6P42226 847 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 AS3MTQ9HBK9 375 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
CDH1-201ENST00000261769 SLC1A4P43007 532 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 TCP10Q12799 353 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
CDH1-201ENST00000261769 HEG1Q9ULI3 1381 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 ADGRB3O60242 1522 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 SYKP43405 635 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 IRX3P78415 501 aaPredicted RBP15.91■□□□□ 0.14
CDH1-201ENST00000261769 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
CDH1-201ENST00000261769 GJD4Q96KN9 370 aaPredicted RBP15.91■□□□□ 0.14
CDH1-201ENST00000261769 CAVIN2O95810 425 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 CHST3Q7LGC8 479 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 TNPO1Q92973 898 aaKnown RBP15.9■□□□□ 0.14
CDH1-201ENST00000261769 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 ZNF532Q9HCE3 1301 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 BACH1O14867 736 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 APOBRQ0VD83 1088 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 PRKG1Q13976 671 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 SSH3Q8TE77 659 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
CDH1-201ENST00000261769 ZNF804BA4D1E1 1349 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 B4E1Z4 1266 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 RPS6KA4O75676 772 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 ARHGAP29Q52LW3 1261 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 JAKMIP3Q5VZ66 844 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 RUFY3Q7L099 469 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 SYCE3A1L190 88 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 CHRNDQ07001 517 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 TCHPQ9BT92 498 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
CDH1-201ENST00000261769 CDC42BPGQ6DT37 1551 aa15.9■□□□□ 0.14
CDH1-201ENST00000261769 TGFBRAP1Q8WUH2 860 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 LZTS2Q9BRK4 669 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 GOPCQ9HD26 462 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
CDH1-201ENST00000261769 SEMA3EO15041 775 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 UBE2HP62256 183 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 CCDC93Q567U6 631 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 ADRA2BP18089 450 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH1-201ENST00000261769 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH1-201ENST00000261769 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 ZKSCAN3Q9BRR0 538 aa15.89■□□□□ 0.13
CDH1-201ENST00000261769 ANGEL1Q9UNK9 670 aaKnown RBP15.89■□□□□ 0.13
CDH1-201ENST00000261769 IQCEQ6IPM2 695 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
CDH1-201ENST00000261769 DOK7Q18PE1 504 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 TNNT3P45378 269 aaPredicted RBP15.88■□□□□ 0.13
CDH1-201ENST00000261769 GYG1P46976 350 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 BRAPQ7Z569 592 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
CDH1-201ENST00000261769 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
CDH1-201ENST00000261769 ABCC4O15439 1325 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 OVOS2A0A0J9YW53 1432 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 OVOS2Q6IE36 1432 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 PDE8BO95263 885 aa15.88■□□□□ 0.13
CDH1-201ENST00000261769 PRDM1O75626 825 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 TOP1P11387 765 aaKnown RBP15.87■□□□□ 0.13
CDH1-201ENST00000261769 ZYXQ15942 572 aaKnown RBP15.87■□□□□ 0.13
CDH1-201ENST00000261769 STX1AQ16623 288 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 DKC1O60832 514 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH1-201ENST00000261769 KRT13P13646 458 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 DALRD3Q5D0E6 543 aaKnown RBP15.87■□□□□ 0.13
CDH1-201ENST00000261769 COPRSQ9NQ92 184 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 SLC5A4Q9NY91 659 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 SLC27A3Q5K4L6 730 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 APBB1IPQ7Z5R6 666 aaPredicted RBP15.87■□□□□ 0.13
CDH1-201ENST00000261769 CHURC1Q8WUH1 139 aa15.87■□□□□ 0.13
CDH1-201ENST00000261769 RNF17Q9BXT8 1623 aaKnown RBP15.87■□□□□ 0.13
CDH1-201ENST00000261769 MMP10P09238 476 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 AK2P54819 239 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 GREM2Q9H772 168 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDH1-201ENST00000261769 GRPEL1Q9HAV7 217 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
CDH1-201ENST00000261769 NPR1P16066 1061 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 NOD1Q9Y239 953 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 DEXIO95424 95 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 DTHD1Q6ZMT9 781 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms