RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ADORA1P30542 326 aa16.83■□□□□ 0.29
SFSWAP-201ENST00000261674 DPCR1Q3MIW9 517 aa16.83■□□□□ 0.29
SFSWAP-201ENST00000261674 HSP90AA4PQ58FG1 418 aa16.83■□□□□ 0.29
SFSWAP-201ENST00000261674 RALYLQ86SE5 291 aaKnown RBP16.83■□□□□ 0.29
SFSWAP-201ENST00000261674 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.29
SFSWAP-201ENST00000261674 IFNKQ9P0W0 207 aa16.83■□□□□ 0.29
SFSWAP-201ENST00000261674 LMOD1P29536 600 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 RABL6Q3YEC7 729 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 KRT27Q7Z3Y8 459 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 HELLSQ9NRZ9 838 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 PAXBP1Q9Y5B6 917 aa16.83■□□□□ 0.28
SFSWAP-201ENST00000261674 CTIFO43310 598 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 PRC1O43663 620 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 FOXO4P98177 505 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 EXOSC10Q01780 885 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 DHX40Q8IX18 779 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 BCL9O00512 1426 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 CAVIN2O95810 425 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 FDPSP14324 419 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 IL15P40933 162 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 AIFM3Q96NN9 605 aa16.82■□□□□ 0.28
SFSWAP-201ENST00000261674 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 ZNF771Q7L3S4 317 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 TNS2Q63HR2 1409 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 EYA2O00167 538 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 HOMER1Q86YM7 354 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 FGAP02671 866 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 LRP10Q7Z4F1 713 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 LINC00116Q8NCU8 138 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 XPO4Q9C0E2 1151 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-201ENST00000261674 GNPATO15228 680 aa16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 SPTLC2O15270 562 aa16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 DMTNQ08495 405 aa16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 FAM177A1Q8N128 213 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 DENND2AQ9ULE3 1009 aa16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
SFSWAP-201ENST00000261674 SCARF1Q14162 830 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 ELF2Q15723 593 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 KIAA1468Q9P260 1216 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 RXRBP28702 533 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 ZAP70P43403 619 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 ADALQ6DHV7 355 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 CCDC82Q8N4S0 544 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
SFSWAP-201ENST00000261674 ZNF213O14771 459 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 ZNF202O95125 648 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 CASP7P55210 303 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 FMR1NBQ8N0W7 255 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 LINC00301Q8NCQ3 95 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 ZNF274Q96GC6 653 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 H7C1W4 665 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 SFPQP23246 707 aaKnown RBP eCLIP16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-201ENST00000261674 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 ATP2B1P20020 1258 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 TRDNQ13061 729 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 CCZ1BP86790 482 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 CCZ1P86791 482 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 GOLGA8FQ08AF8 430 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 GOLGA8DPQ0D2H9 430 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 SARM1Q6SZW1 724 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 PHKBQ93100 1093 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 TOMM22Q9NS69 142 aa16.77■□□□□ 0.28
SFSWAP-201ENST00000261674 MYSM1Q5VVJ2 828 aa16.77■□□□□ 0.27
SFSWAP-201ENST00000261674 NFXL1Q6ZNB6 911 aa16.77■□□□□ 0.27
SFSWAP-201ENST00000261674 TMX1Q9H3N1 280 aa16.77■□□□□ 0.27
SFSWAP-201ENST00000261674 LRRC4BQ9NT99 713 aa16.77■□□□□ 0.27
SFSWAP-201ENST00000261674 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.27
SFSWAP-201ENST00000261674 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.27
SFSWAP-201ENST00000261674 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 NEMFO60524 1076 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 APBA3O96018 575 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 ATP1A3P13637 1013 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 SPECC1Q5M775 1068 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms