RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 COG7P83436 770 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 HSP90AB4PQ58FF6 505 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 SSH1Q8WYL5 1049 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 PAIP2BQ9ULR5 123 aaKnown RBP12.05□□□□□ -0.48
KPNA3-201ENST00000261667 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 RALYLQ86SE5 291 aaKnown RBP12.04□□□□□ -0.48
KPNA3-201ENST00000261667 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
KPNA3-201ENST00000261667 ALS2CR12Q96Q35 445 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 ORC3Q9UBD5 711 aaPredicted RBP12.04□□□□□ -0.48
KPNA3-201ENST00000261667 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 TRIM7Q9C029 511 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 KIF9Q9HAQ2 790 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 NSD2O96028 1365 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 CCDC151A5D8V7 595 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 MARCH6O60337 910 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 TRIM27P14373 513 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 STMN2Q93045 179 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
KPNA3-201ENST00000261667 GUCY1B3Q02153 619 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 ETAA1Q9NY74 926 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 C3P01024 1663 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 TUBB2AQ13885 445 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 CCDC63Q8NA47 563 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 TUBB2BQ9BVA1 445 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 DYTNA2CJ06 578 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 DNAJC8O75937 253 aaPredicted RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 SNUPNO95149 360 aaKnown RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 A2ML1A8K2U0 1454 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 TAF11Q15544 211 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 RAB3IL1Q8TBN0 382 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
KPNA3-201ENST00000261667 FAF1Q9UNN5 650 aaPredicted RBP12.03□□□□□ -0.48
KPNA3-201ENST00000261667 TLDC2A0PJX2 215 aa12.02□□□□□ -0.48
KPNA3-201ENST00000261667 HNRNPCP07910 306 aaKnown RBP eCLIP12.02□□□□□ -0.48
KPNA3-201ENST00000261667 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.48
KPNA3-201ENST00000261667 ACBD5Q5T8D3 534 aaPredicted RBP12.02□□□□□ -0.48
KPNA3-201ENST00000261667 HIBCHQ6NVY1 386 aaPredicted RBP12.02□□□□□ -0.48
KPNA3-201ENST00000261667 IQCGQ9H095 443 aaKnown RBP12.02□□□□□ -0.48
KPNA3-201ENST00000261667 PAX7P23759 505 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 MTHFSP49914 203 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 APOBRQ0VD83 1088 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 DYNC1I2Q13409 638 aaKnown RBP12.02□□□□□ -0.49
KPNA3-201ENST00000261667 SETDB1Q15047 1291 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
KPNA3-201ENST00000261667 ARL10Q8N8L6 244 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 ZNF428Q96B54 188 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 hCG_2014768A0A024R1R8 64 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 MYO1EQ12965 1108 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 CRYMQ14894 314 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 OSBPL9Q96SU4 736 aa12.02□□□□□ -0.49
KPNA3-201ENST00000261667 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
KPNA3-201ENST00000261667 CUL3Q13618 768 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 SDCCAG8Q86SQ7 713 aaPredicted RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 GBP7Q8N8V2 638 aaPredicted RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 NECTIN2Q92692 538 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 CORO7P57737 925 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 ZFYVE27Q5T4F4 411 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 KNDC1Q76NI1 1749 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 ARHGAP6O43182 974 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 SF3B2Q13435 895 aaKnown RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 NECAB1Q8N987 351 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 C14orf93Q9H972 538 aaKnown RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 USP32Q8NFA0 1604 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 CDKL5O76039 1030 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 SDSP20132 328 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 G3BP1Q13283 466 aaKnown RBP eCLIP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 SPTY2D1Q68D10 685 aaPredicted RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 INTS8Q75QN2 995 aaKnown RBP12.01□□□□□ -0.49
KPNA3-201ENST00000261667 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
KPNA3-201ENST00000261667 PTPRMP28827 1452 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 CTIFO43310 598 aaKnown RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 SLMAPQ14BN4 828 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 FAM167BQ9BTA0 163 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 EXOC6BQ9Y2D4 811 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 ALKQ9UM73 1620 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 GNAI3P08754 354 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 UBTFL1P0CB47 393 aaPredicted RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 IDI1Q13907 227 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 GKAP1Q5VSY0 366 aaPredicted RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 HHATQ5VTY9 493 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 CC2D1AQ6P1N0 951 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms