RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 FAM210AQ96ND0 272 aa9.4□□□□□ -0.9
SNCAIP-201ENST00000261367 CCDC92Q53HC0 331 aaPredicted RBP9.4□□□□□ -0.91
SNCAIP-201ENST00000261367 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.91
SNCAIP-201ENST00000261367 EVI5O60447 810 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 SRGAP1Q7Z6B7 1085 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 IQCA1Q86XH1 822 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 CPLX3Q8WVH0 158 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 GFM2Q969S9 779 aaKnown RBP9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 ADGRF5Q8IZF2 1346 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 LOC102724159A0A0B4J2E5 919 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 NLRP12P59046 1061 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 PWP2Q15269 919 aaKnown RBP9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 CLCN6P51797 869 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 LONRF2Q1L5Z9 754 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 NEK1Q96PY6 1258 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 NUP58Q9BVL2 599 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 BAIAP2L1Q9UHR4 511 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 GSTTP1A0A1W2PQM5 241 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 AKR1B10O60218 316 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 POTEJP0CG39 1038 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 FANCCQ00597 558 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 BIRC2Q13490 618 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
SNCAIP-201ENST00000261367 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 C17orf53Q8N3J3 647 aaPredicted RBP9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 GPT2Q8TD30 523 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 ECHDC1Q9NTX5 307 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 AKAP2Q9Y2D5 859 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 NEXMIFQ5QGS0 1516 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 NDC80O14777 642 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 EIF2S2P20042 333 aaKnown RBP9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 PPP2R5EQ16537 467 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 SECISBP2LQ93073 1101 aaKnown RBP9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 A0A1W2PRG0 241 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 CETN3O15182 167 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 SPTLC2O15270 562 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 CTIFO43310 598 aaKnown RBP9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 PFDN1O60925 122 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 TEX11Q8IYF3 940 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 TSC22D3Q99576 134 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 FAM204AQ9H8W3 233 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 NKIRAS1Q9NYS0 192 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 EID1Q9Y6B2 187 aa9.38□□□□□ -0.91
SNCAIP-201ENST00000261367 PPFIA2O75334 1257 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 MTIF2P46199 727 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 TRAF1Q13077 416 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC152Q4G0S7 254 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 ZFYVE27Q5T4F4 411 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 ZNF526Q8TF50 670 aaPredicted RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 SELENOSQ9BQE4 189 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 JPH2Q9BR39 696 aaPredicted RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 PYCARDQ9ULZ3 195 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 CASQ2O14958 399 aaPredicted RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 TDRD12Q587J7 1177 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 FYB2Q5VWT5 728 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 TSC1Q92574 1164 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 BCAP29Q9UHQ4 241 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 ZNF521Q96K83 1311 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 MAP3K21Q5TCX8 1036 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 ALS2CLQ60I27 953 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 FBXO38Q6PIJ6 1188 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 SREK1Q8WXA9 508 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 RUBCNQ92622 972 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 NEUROD6Q96NK8 337 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 Q9H521 79 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 PDE11AQ9HCR9 933 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 CDC23Q9UJX2 597 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 ZBTB12Q9Y330 459 aaPredicted RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 E7EVH7 732 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 BIN1O00499 593 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 STX10O60499 249 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 KARSQ15046 597 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 TTC5Q8N0Z6 440 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 LZTFL1Q9NQ48 299 aa9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.37□□□□□ -0.91
SNCAIP-201ENST00000261367 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 KRT18P05783 430 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 HMOX1P09601 288 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 RWDD2BP57060 319 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 RMDN2Q96LZ7 410 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms