RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 HARSP12081 509 aaKnown RBP13.67□□□□□ -0.22
COL8A1-201ENST00000261037 SPAG1Q07617 926 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 RHOXF2Q9BQY4 288 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 DNMT1P26358 1616 aaKnown RBP13.67□□□□□ -0.22
COL8A1-201ENST00000261037 PRIMPOLQ96LW4 560 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 PARP1P09874 1014 aaKnown RBP13.67□□□□□ -0.22
COL8A1-201ENST00000261037 CCDC25Q86WR0 208 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 DNAJC21Q5F1R6 531 aaKnown RBP13.67□□□□□ -0.22
COL8A1-201ENST00000261037 ATRIPQ8WXE1 791 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 CCDC42Q96M95 316 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
COL8A1-201ENST00000261037 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
COL8A1-201ENST00000261037 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 CCDC114Q96M63 670 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 ARMT1Q9H993 441 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 GNPATO15228 680 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL8A1-201ENST00000261037 CALML3P27482 149 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 KIF5AQ12840 1032 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
COL8A1-201ENST00000261037 A0A1B0GVL5 298 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 BACH1O14867 736 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 KRT5P13647 590 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 ARFGAP3Q9NP61 516 aa13.66□□□□□ -0.22
COL8A1-201ENST00000261037 B4E1Z4 1266 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 KRT83P78385 493 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 GOLGA1Q92805 767 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 EYA1Q99502 592 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 FLT4P35916 1363 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 VAMP4O75379 141 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 SYT10Q6XYQ8 523 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 LRRC45Q96CN5 670 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 NSRP1Q9H0G5 558 aaKnown RBP13.65□□□□□ -0.22
COL8A1-201ENST00000261037 CHMLP26374 656 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 TRAF1Q13077 416 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 RBM17Q96I25 401 aaKnown RBP13.65□□□□□ -0.22
COL8A1-201ENST00000261037 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
COL8A1-201ENST00000261037 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
COL8A1-201ENST00000261037 DTNBO60941 627 aa13.65□□□□□ -0.23
COL8A1-201ENST00000261037 HOXC9P31274 260 aa13.65□□□□□ -0.23
COL8A1-201ENST00000261037 PRPHP41219 470 aa13.65□□□□□ -0.23
COL8A1-201ENST00000261037 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.23
COL8A1-201ENST00000261037 G2E3Q7L622 706 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
COL8A1-201ENST00000261037 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 KRT86O43790 486 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 SNX21Q969T3 373 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
COL8A1-201ENST00000261037 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 PODXL2Q9NZ53 605 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 HSPA4P34932 840 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 ZYXQ15942 572 aaKnown RBP13.64□□□□□ -0.23
COL8A1-201ENST00000261037 DDX12PQ92771 950 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC6Q16204 474 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
COL8A1-201ENST00000261037 UFL1O94874 794 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 PLCG2P16885 1265 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 RBM28Q9NW13 759 aaKnown RBP13.63□□□□□ -0.23
COL8A1-201ENST00000261037 NDC80O14777 642 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 ITGA6P23229 1130 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 MSL1Q68DK7 614 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 VPS18Q9P253 973 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 PCDH11XQ9BZA7 1347 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 PCDH11YQ9BZA8 1340 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
COL8A1-201ENST00000261037 TOM1O60784 492 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 SEC24BO95487 1268 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 PIK3AP1Q6ZUJ8 805 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 HS2ST1Q7LGA3 356 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 FAM170AA1A519 330 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 OPA1O60313 960 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 GNA11P29992 359 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC24Q8N4L8 307 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 KCNK9Q9NPC2 374 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 SAMD9Q5K651 1589 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 NPATQ14207 1427 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 KRT9P35527 623 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 TIMM10P62072 90 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms