RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PRKAB2O43741 272 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 TRAK2O60296 914 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 DTNBO60941 627 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 NPR1P16066 1061 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 ATP2B4P23634 1241 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 ZNF384Q8TF68 577 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 CWC22Q9HCG8 908 aaKnown RBP22.45■■□□□ 1.18
TRIM47-201ENST00000254816 POLLQ9UGP5 575 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 ME3Q16798 604 aa22.44■■□□□ 1.18
TRIM47-201ENST00000254816 CHD4Q14839 1912 aa22.44■■□□□ 1.18
TRIM47-201ENST00000254816 INTS4Q96HW7 963 aaKnown RBP22.43■■□□□ 1.18
TRIM47-201ENST00000254816 Q6ZUG5 572 aa22.43■■□□□ 1.18
TRIM47-201ENST00000254816 TBC1D16Q8TBP0 767 aa22.43■■□□□ 1.18
TRIM47-201ENST00000254816 EPB41L4AQ9HCS5 686 aaPredicted RBP22.43■■□□□ 1.18
TRIM47-201ENST00000254816 ZNF213O14771 459 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 PRDX5P30044 214 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 CHST3Q7LGC8 479 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 ZNF804AQ7Z570 1209 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 CCDC83Q8IWF9 413 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 SP8Q8IXZ3 490 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 ZNF622Q969S3 477 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRIM47-201ENST00000254816 PODXL2Q9NZ53 605 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 PDS5AQ29RF7 1337 aaKnown RBP22.42■■□□□ 1.18
TRIM47-201ENST00000254816 DDX11L8A8MPP1 907 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 PATL2C9JE40 543 aaKnown RBP22.42■■□□□ 1.18
TRIM47-201ENST00000254816 C6orf229H3BNL8 230 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 NAA16Q6N069 864 aaPredicted RBP22.42■■□□□ 1.18
TRIM47-201ENST00000254816 ALDH8A1Q9H2A2 487 aaPredicted RBP22.42■■□□□ 1.18
TRIM47-201ENST00000254816 ATP6V0A2Q9Y487 856 aa22.42■■□□□ 1.18
TRIM47-201ENST00000254816 MECOMQ03112 1051 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 ST3GAL1Q11201 340 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 C15orf52Q6ZUT6 534 aaKnown RBP22.41■■□□□ 1.18
TRIM47-201ENST00000254816 IFNL3Q8IZI9 196 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 TDRD7Q8NHU6 1098 aaKnown RBP22.41■■□□□ 1.18
TRIM47-201ENST00000254816 MASTLQ96GX5 879 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 NBPF3Q9H094 633 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 MAST2Q6P0Q8 1798 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 GSG1L2A8MUP6 293 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 DHX32Q7L7V1 743 aaKnown RBP22.41■■□□□ 1.18
TRIM47-201ENST00000254816 C2CD5Q86YS7 1000 aa22.41■■□□□ 1.18
TRIM47-201ENST00000254816 NSUN4Q96CB9 384 aaKnown RBP22.41■■□□□ 1.18
TRIM47-201ENST00000254816 ZSCAN31Q96LW9 406 aaPredicted RBP22.41■■□□□ 1.18
TRIM47-201ENST00000254816 ALDH1B1P30837 517 aa22.4■■□□□ 1.18
TRIM47-201ENST00000254816 DYNLL1P63167 89 aaKnown RBP22.4■■□□□ 1.18
TRIM47-201ENST00000254816 ANKRD1Q15327 319 aa22.4■■□□□ 1.18
TRIM47-201ENST00000254816 BAZ2AQ9UIF9 1905 aaKnown RBP22.4■■□□□ 1.18
TRIM47-201ENST00000254816 MAGEB6P1A0A0J9YX57 407 aa22.4■■□□□ 1.18
TRIM47-201ENST00000254816 HMGB1P09429 215 aaKnown RBP22.4■■□□□ 1.18
TRIM47-201ENST00000254816 TMC4Q7Z404 712 aa22.4■■□□□ 1.18
TRIM47-201ENST00000254816 SLX4Q8IY92 1834 aa22.39■■□□□ 1.18
TRIM47-201ENST00000254816 EXOSC10Q01780 885 aaKnown RBP22.39■■□□□ 1.17
TRIM47-201ENST00000254816 STK3Q13188 491 aa22.39■■□□□ 1.17
TRIM47-201ENST00000254816 CD209Q9NNX6 404 aa22.39■■□□□ 1.17
TRIM47-201ENST00000254816 SH2B1Q9NRF2 756 aaPredicted RBP22.39■■□□□ 1.17
TRIM47-201ENST00000254816 CHRNA5P30532 468 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 FGD1P98174 961 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 TBC1D10CQ8IV04 446 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 SDR42E1Q8WUS8 393 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 BRF1Q92994 677 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 NAPBQ9H115 298 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 DUOX1Q9NRD9 1551 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 RIMBP2O15034 1052 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 NUCB2P80303 420 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 GBP4Q96PP9 640 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 RIOK1Q9BRS2 568 aaKnown RBP22.38■■□□□ 1.17
TRIM47-201ENST00000254816 ZDHHC9Q9Y397 364 aa22.38■■□□□ 1.17
TRIM47-201ENST00000254816 GRIK5Q16478 980 aa22.37■■□□□ 1.17
TRIM47-201ENST00000254816 FOXD4L5Q5VV16 416 aaPredicted RBP22.37■■□□□ 1.17
TRIM47-201ENST00000254816 NKX2-3Q8TAU0 364 aa22.37■■□□□ 1.17
TRIM47-201ENST00000254816 FOXD4L4Q8WXT5 416 aaPredicted RBP22.37■■□□□ 1.17
TRIM47-201ENST00000254816 H0YIN7 160 aa22.37■■□□□ 1.17
TRIM47-201ENST00000254816 GNAT2P19087 354 aa22.37■■□□□ 1.17
TRIM47-201ENST00000254816 ALX1Q15699 326 aa22.37■■□□□ 1.17
TRIM47-201ENST00000254816 TDO2P48775 406 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 CTDSPL2Q05D32 466 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 INCENPQ9NQS7 918 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 MYH2Q9UKX2 1941 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 KIAA1551Q9HCM1 1747 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 MPNDQ8N594 471 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 WDR66Q8TBY9 1149 aa22.36■■□□□ 1.17
TRIM47-201ENST00000254816 ZNF219Q9P2Y4 722 aaPredicted RBP22.36■■□□□ 1.17
TRIM47-201ENST00000254816 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
TRIM47-201ENST00000254816 NCOA7Q8NI08 942 aa22.35■■□□□ 1.17
TRIM47-201ENST00000254816 GPHNQ9NQX3 736 aaPredicted RBP22.35■■□□□ 1.17
TRIM47-201ENST00000254816 AATFQ9NY61 560 aaKnown RBP eCLIP22.35■■□□□ 1.17
TRIM47-201ENST00000254816 IL1R1P14778 569 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 APOBRQ0VD83 1088 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 DZIP1Q86YF9 867 aaKnown RBP22.34■■□□□ 1.17
TRIM47-201ENST00000254816 MB21D2Q8IYB1 491 aaPredicted RBP22.34■■□□□ 1.17
TRIM47-201ENST00000254816 SMC3Q9UQE7 1217 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 ZMYM6O95789 1325 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 ZBTB22O15209 634 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 LDHBP07195 334 aaKnown RBP22.34■■□□□ 1.17
TRIM47-201ENST00000254816 DPP8Q6V1X1 898 aaPredicted RBP22.34■■□□□ 1.17
TRIM47-201ENST00000254816 RALYLQ86SE5 291 aaKnown RBP22.34■■□□□ 1.17
TRIM47-201ENST00000254816 STK11IPQ8N1F8 1099 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 NACAP1Q9BZK3 213 aa22.34■■□□□ 1.17
TRIM47-201ENST00000254816 SALL1Q9NSC2 1324 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms