RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ZNF594Q96JF6 807 aaPredicted RBP21.93■■□□□ 1.1
PPFIA1-201ENST00000253925 MPHOSPH10O00566 681 aaKnown RBP21.93■■□□□ 1.1
PPFIA1-201ENST00000253925 IDEP14735 1019 aa21.93■■□□□ 1.1
PPFIA1-201ENST00000253925 PLCD3Q8N3E9 789 aa21.93■■□□□ 1.1
PPFIA1-201ENST00000253925 MED14O60244 1454 aa21.93■■□□□ 1.1
PPFIA1-201ENST00000253925 ALS2CR12Q96Q35 445 aa21.93■■□□□ 1.1
PPFIA1-201ENST00000253925 LIG1P18858 919 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 ERO1AQ96HE7 468 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 STX8Q9UNK0 236 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 CALML3P27482 149 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 VPS36Q86VN1 386 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 B4E1Z4 1266 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 E7EWF7 191 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 KRT2P35908 639 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 IMPACTQ9P2X3 320 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 NIP7Q9Y221 180 aaKnown RBP eCLIP21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 ADGRB3O60242 1522 aa21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 TRIM21P19474 475 aaKnown RBP21.92■■□□□ 1.1
PPFIA1-201ENST00000253925 PSMA7O14818 248 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 MBD4O95243 580 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 TTC6Q86TZ1 520 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 A1BGP04217 495 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 LRRC27Q9C0I9 530 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 EXOC1Q9NV70 894 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 ITGA6P23229 1130 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 CYLC1P35663 651 aaPredicted RBP21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 CCDC96Q2M329 555 aa21.91■■□□□ 1.1
PPFIA1-201ENST00000253925 CTAGE15A4D2H0 777 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 CTAGE8P0CG41 777 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 CTAGE6Q86UF2 777 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 CTAGE4Q8IX94 777 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 IPO4Q8TEX9 1081 aaKnown RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 ZNF274Q96GC6 653 aaPredicted RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 COPRSQ9NQ92 184 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 OTUD7BQ6GQQ9 843 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 CRACR2BQ8N4Y2 399 aaPredicted RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 SEPT11Q9NVA2 429 aaKnown RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 OGFRQ9NZT2 677 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 ZNF202O95125 648 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 GSTO1P78417 241 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 MIGA1Q8NAN2 632 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 ZFP91Q96JP5 570 aaPredicted RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 HMGB2P26583 209 aaKnown RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 ADCK5Q3MIX3 580 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 CEP112Q8N8E3 955 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 RPGRQ92834 1020 aaKnown RBP21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 KCNH3Q9ULD8 1083 aa21.9■■□□□ 1.1
PPFIA1-201ENST00000253925 TUBB4BP68371 445 aa21.89■■□□□ 1.1
PPFIA1-201ENST00000253925 HAUS7Q99871 368 aa21.89■■□□□ 1.09
PPFIA1-201ENST00000253925 CUTAO60888 179 aa21.89■■□□□ 1.09
PPFIA1-201ENST00000253925 IBSPP21815 317 aaPredicted RBP21.89■■□□□ 1.09
PPFIA1-201ENST00000253925 PFKFB2O60825 505 aa21.89■■□□□ 1.09
PPFIA1-201ENST00000253925 GOLGA1Q92805 767 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 VAT1LQ9HCJ6 419 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 DEXIO95424 95 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 CCDC40Q4G0X9 1142 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 IQUBQ8NA54 791 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 IRX3P78415 501 aaPredicted RBP21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 CKAP4Q07065 602 aaKnown RBP21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 PUM3Q15397 648 aaKnown RBP21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 SMARCC1Q92922 1105 aaPredicted RBP21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 NLRP12P59046 1061 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 FANCCQ00597 558 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 NLRP1Q9C000 1473 aa21.88■■□□□ 1.09
PPFIA1-201ENST00000253925 SHTN1A0MZ66 631 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 TSPY3P0CV98 308 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 TSPY8P0CW00 308 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 GTF2A1P52655 376 aaPredicted RBP21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 NBPF5PQ86XG9 351 aaPredicted RBP21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 BAG1Q99933 345 aaPredicted RBP21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 LMAN1P49257 510 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 NLRP3Q96P20 1036 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 CTAGE9A4FU28 777 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 AKR1B10O60218 316 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 ADALQ6DHV7 355 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 JADE2Q9NQC1 790 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 NR1I2O75469 434 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 PHKG2P15735 406 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 STX17P56962 302 aa21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 NAA15Q9BXJ9 866 aaKnown RBP21.87■■□□□ 1.09
PPFIA1-201ENST00000253925 TAF5LO75529 589 aa21.86■■□□□ 1.09
PPFIA1-201ENST00000253925 RBM28Q9NW13 759 aaKnown RBP21.86■■□□□ 1.09
PPFIA1-201ENST00000253925 POLA2Q14181 598 aa21.86■■□□□ 1.09
PPFIA1-201ENST00000253925 KLHL34Q8N239 644 aa21.86■■□□□ 1.09
PPFIA1-201ENST00000253925 CABP5Q9NP86 173 aa21.86■■□□□ 1.09
PPFIA1-201ENST00000253925 ERBB4Q15303 1308 aa21.86■■□□□ 1.09
PPFIA1-201ENST00000253925 PDE8AO60658 829 aa21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 KRT40Q6A162 431 aa21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 CNGA4Q8IV77 575 aa21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 DIS3L2Q8IYB7 885 aaKnown RBP21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 ZAP70P43403 619 aa21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 MYSM1Q5VVJ2 828 aa21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 USP28Q96RU2 1077 aa21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 SEC62Q99442 399 aaKnown RBP21.85■■□□□ 1.09
PPFIA1-201ENST00000253925 PIP4K2BP78356 416 aa21.84■■□□□ 1.09
PPFIA1-201ENST00000253925 PROSER3Q2NL68 480 aa21.84■■□□□ 1.09
PPFIA1-201ENST00000253925 ZKSCAN3Q9BRR0 538 aa21.84■■□□□ 1.09
PPFIA1-201ENST00000253925 SLC4A8Q2Y0W8 1093 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms