RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HAUS7Q99871 368 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 ATP2B4P23634 1241 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
UBE4B-201ENST00000253251 SPAG1Q07617 926 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 CNPY2Q9Y2B0 182 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 DESP17661 470 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 CETN1Q12798 172 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 HOOK2Q96ED9 719 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
UBE4B-201ENST00000253251 DEXIO95424 95 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 ZAP70P43403 619 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
UBE4B-201ENST00000253251 SEMA3EO15041 775 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 ZSCAN23Q3MJ62 389 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 LZTS2Q9BRK4 669 aa17.17■□□□□ 0.34
UBE4B-201ENST00000253251 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
UBE4B-201ENST00000253251 SPA17Q15506 151 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 CCDC181Q5TID7 509 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.346e-7■■□□□ 14.3
UBE4B-201ENST00000253251 ERLIN2O94905 339 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 SYT1P21579 422 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 DNM1Q05193 864 aaKnown RBP17.16■□□□□ 0.34
UBE4B-201ENST00000253251 KIAA1328Q86T90 577 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 PIK3C2BO00750 1634 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 ZNF532Q9HCE3 1301 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 TAF5LO75529 589 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 SLC4A8Q2Y0W8 1093 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 RILPL1Q5EBL4 403 aa17.16■□□□□ 0.34
UBE4B-201ENST00000253251 SMARCC2Q8TAQ2 1214 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 TECPR2O15040 1411 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 YEATS4O95619 227 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 IDEP14735 1019 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 CACNA2D4Q7Z3S7 1137 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 QTRT2Q9H974 415 aaKnown RBP17.15■□□□□ 0.34
UBE4B-201ENST00000253251 EXOC1Q9NV70 894 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 C1orf167Q5SNV9 1468 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
UBE4B-201ENST00000253251 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 VEZTQ9HBM0 779 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 STAT6P42226 847 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 MPNDQ8N594 471 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 CTAGE1Q96RT6 745 aa17.15■□□□□ 0.34
UBE4B-201ENST00000253251 B4E1Z4 1266 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
UBE4B-201ENST00000253251 TBCAO75347 108 aaKnown RBP17.14■□□□□ 0.33
UBE4B-201ENST00000253251 ERLIN1O75477 346 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 ZBTB1Q9Y2K1 713 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 GOLGA6L9A6NEM1 432 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 PDE8BO95263 885 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
UBE4B-201ENST00000253251 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
UBE4B-201ENST00000253251 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
UBE4B-201ENST00000253251 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 USP25Q9UHP3 1055 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
UBE4B-201ENST00000253251 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 CCDC150Q8NCX0 1101 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 WDR78Q5VTH9 848 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 TAF4BQ92750 862 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
UBE4B-201ENST00000253251 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
UBE4B-201ENST00000253251 UBA5Q9GZZ9 404 aa17.12■□□□□ 0.33
UBE4B-201ENST00000253251 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
UBE4B-201ENST00000253251 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
UBE4B-201ENST00000253251 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
UBE4B-201ENST00000253251 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
UBE4B-201ENST00000253251 CCDC40Q4G0X9 1142 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 ARHGEF10LQ9HCE6 1279 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 BIN1O00499 593 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 CYP27B1O15528 508 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 PIGBQ92521 554 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 USO1O60763 962 aaKnown RBP17.11■□□□□ 0.33
UBE4B-201ENST00000253251 CETN2P41208 172 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 PPP1R2P41236 205 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 PTPN14Q15678 1187 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 KRI1Q8N9T8 703 aaKnown RBP17.11■□□□□ 0.33
UBE4B-201ENST00000253251 PSMA7O14818 248 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 PRM3Q9NNZ6 103 aa17.11■□□□□ 0.33
UBE4B-201ENST00000253251 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
UBE4B-201ENST00000253251 USPL1Q5W0Q7 1092 aa17.1■□□□□ 0.33
UBE4B-201ENST00000253251 USP37Q86T82 979 aa17.1■□□□□ 0.33
UBE4B-201ENST00000253251 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
UBE4B-201ENST00000253251 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
UBE4B-201ENST00000253251 KIF5CO60282 957 aa17.1■□□□□ 0.33
UBE4B-201ENST00000253251 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms