RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 CRACR2AQ9BSW2 395 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 RNF17Q9BXT8 1623 aaKnown RBP10.59□□□□□ -0.71
COL21A1-201ENST00000244728 HOXB7P09629 217 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 PHKG2P15735 406 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 RTN1Q16799 776 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 IFIT1BQ5T764 474 aaKnown RBP10.59□□□□□ -0.71
COL21A1-201ENST00000244728 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 AATKQ6ZMQ8 1374 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 PNPLA6Q8IY17 1366 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 ELP1O95163 1332 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 FANCCQ00597 558 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 ESR2Q92731 530 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 CRNKL1Q9BZJ0 848 aaKnown RBP10.58□□□□□ -0.72
COL21A1-201ENST00000244728 MCM9Q9NXL9 1143 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
COL21A1-201ENST00000244728 TSPOAP1O95153 1857 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 LDHCP07864 332 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 UBA7P41226 1012 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 DNA2P51530 1060 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 BEND3Q5T5X7 828 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 C11orf57Q6ZUT1 292 aaPredicted RBP10.58□□□□□ -0.72
COL21A1-201ENST00000244728 CEP152O94986 1710 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 EFCAB6Q5THR3 1501 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 FAM182BQ5T319 152 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 GOLGA1Q92805 767 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 KCNF1Q9H3M0 494 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 LZTFL1Q9NQ48 299 aa10.58□□□□□ -0.72
COL21A1-201ENST00000244728 PUF60Q9UHX1 559 aaKnown RBP10.58□□□□□ -0.72
COL21A1-201ENST00000244728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL21A1-201ENST00000244728 CAPN2P17655 700 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ZAP70P43403 619 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 MYL5Q02045 173 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 KRBA2Q6ZNG9 492 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ARHGEF25Q86VW2 580 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 PHACTR2O75167 634 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ZSCAN20P17040 1043 aaPredicted RBP10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ATL3Q6DD88 541 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 KIAA1328Q86T90 577 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 CCDC148Q8NFR7 591 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 PRM3Q9NNZ6 103 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 IMPACTQ9P2X3 320 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ASAP1Q9ULH1 1129 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 CPSF1Q10570 1443 aaKnown RBP10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ZNF710Q8N1W2 664 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 NUP88Q99567 741 aaPredicted RBP10.57□□□□□ -0.72
COL21A1-201ENST00000244728 SEPT11Q9NVA2 429 aaKnown RBP10.57□□□□□ -0.72
COL21A1-201ENST00000244728 MAGEB6P1A0A0J9YX57 407 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 TSPY3P0CV98 308 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 TSPY8P0CW00 308 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 ODF2Q5BJF6 829 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 TTC14Q96N46 770 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 LLPHQ9BRT6 129 aaKnown RBP10.57□□□□□ -0.72
COL21A1-201ENST00000244728 BABAM1Q9NWV8 329 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 VPS18Q9P253 973 aa10.57□□□□□ -0.72
COL21A1-201ENST00000244728 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 GPAA1O43292 621 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 LRRC24Q50LG9 513 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 FTOQ9C0B1 505 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL21A1-201ENST00000244728 TMEM94Q12767 1356 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 hCG_1642624A0A1W2PR95 340 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 BAG1Q99933 345 aaPredicted RBP10.56□□□□□ -0.72
COL21A1-201ENST00000244728 RSPH14Q9UHP6 348 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 ZNF202O95125 648 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 KBTBD3Q8NAB2 608 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 KRT23Q9C075 422 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 GLI2P10070 1586 aa10.56□□□□□ -0.72
COL21A1-201ENST00000244728 CDK12Q9NYV4 1490 aaPredicted RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 CCDC175P0C221 793 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 KIF5BP33176 963 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 CCDC181Q5TID7 509 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 FBXO38Q6PIJ6 1188 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 HEATR3Q7Z4Q2 680 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 ATP10DQ9P241 1426 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 KIAA0754O94854 1291 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 PLIN2Q99541 437 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 ZC3H12CQ9C0D7 883 aaKnown RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 TLR7Q9NYK1 1049 aaKnown RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 DDX41Q9UJV9 622 aaKnown RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 ARHGEF10O15013 1369 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 RPAP1Q9BWH6 1393 aaPredicted RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 RHOXF2BP0C7M4 288 aa10.55□□□□□ -0.72
COL21A1-201ENST00000244728 IBSPP21815 317 aaPredicted RBP10.55□□□□□ -0.72
COL21A1-201ENST00000244728 OAS2P29728 719 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms