RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CCDC125Q86Z20 511 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 CHPF2Q9P2E5 772 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 HCLS1P14317 486 aaPredicted RBP14.83□□□□□ -0.04
NEK9-201ENST00000238616 HPDP32754 393 aaPredicted RBP14.83□□□□□ -0.04
NEK9-201ENST00000238616 SEL1L2Q5TEA6 688 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 CNPY2Q9Y2B0 182 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 RTCBQ9Y3I0 505 aaKnown RBP14.83□□□□□ -0.04
NEK9-201ENST00000238616 TRAF1Q13077 416 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
NEK9-201ENST00000238616 ZSCAN16Q9H4T2 348 aaPredicted RBP14.83□□□□□ -0.04
NEK9-201ENST00000238616 VPS18Q9P253 973 aa14.83□□□□□ -0.04
NEK9-201ENST00000238616 KRT19P08727 400 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 ERCC6LQ2NKX8 1250 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 SLC9C2Q5TAH2 1124 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 CCDC42Q96M95 316 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 IVNS1ABPQ9Y6Y0 642 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 OPA1O60313 960 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 SMTNP53814 917 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 EPB41P11171 864 aaKnown RBP14.82□□□□□ -0.04
NEK9-201ENST00000238616 GNL1P36915 607 aaPredicted RBP14.82□□□□□ -0.04
NEK9-201ENST00000238616 IFRD2Q12894 506 aaPredicted RBP14.82□□□□□ -0.04
NEK9-201ENST00000238616 STRN3Q13033 797 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 TSTA3Q13630 321 aaPredicted RBP14.82□□□□□ -0.04
NEK9-201ENST00000238616 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 NSMCE1Q8WV22 266 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 RIOK1Q9BRS2 568 aaKnown RBP14.82□□□□□ -0.04
NEK9-201ENST00000238616 PTPRCP08575 1304 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 KAT6AQ92794 2004 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 MAN1A1P33908 653 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 USH1GQ495M9 461 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 TBC1D9Q6ZT07 1266 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 PAXBP1Q9Y5B6 917 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 BRDTQ58F21 947 aaPredicted RBP14.82□□□□□ -0.04
NEK9-201ENST00000238616 METTL13Q8N6R0 699 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.82□□□□□ -0.04
NEK9-201ENST00000238616 CLUL1Q15846 466 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 FCHSD1Q86WN1 690 aa14.82□□□□□ -0.04
NEK9-201ENST00000238616 KRT86O43790 486 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 TTC30BQ8N4P2 665 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 ECHDC1Q9NTX5 307 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 SETDB1Q15047 1291 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 ANKRD24Q8TF21 1146 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 BSPRYQ5W0U4 402 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 WHAMMQ8TF30 809 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 AMOTL2Q9Y2J4 779 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 M0QZ92 97 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 SPOPO43791 374 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 INTS8Q75QN2 995 aaKnown RBP14.81□□□□□ -0.04
NEK9-201ENST00000238616 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 FAM83GA6ND36 823 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 WDR46O15213 610 aaKnown RBP14.81□□□□□ -0.04
NEK9-201ENST00000238616 LDHBP07195 334 aaKnown RBP14.81□□□□□ -0.04
NEK9-201ENST00000238616 KRT79Q5XKE5 535 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 SAMD15Q9P1V8 674 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 BICDL2A1A5D9 508 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 ATP11AP98196 1134 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 NBPF8Q3BBV2 869 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 HAUS2Q9NVX0 235 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
NEK9-201ENST00000238616 SORBS3O60504 671 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
NEK9-201ENST00000238616 ZNF131P52739 623 aa14.81□□□□□ -0.04
NEK9-201ENST00000238616 ARHGEF2Q92974 986 aaKnown RBP14.81□□□□□ -0.04
NEK9-201ENST00000238616 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 XRCC6P12956 609 aaKnown RBP eCLIP14.8□□□□□ -0.04
NEK9-201ENST00000238616 KCNG4Q8TDN1 519 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 IFT74Q96LB3 600 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 HELBQ8NG08 1087 aaPredicted RBP14.8□□□□□ -0.04
NEK9-201ENST00000238616 GPR161Q8N6U8 529 aaKnown RBP14.8□□□□□ -0.04
NEK9-201ENST00000238616 RNF169Q8NCN4 708 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 UTP11Q9Y3A2 253 aaKnown RBP14.8□□□□□ -0.04
NEK9-201ENST00000238616 ZFYP08048 801 aaPredicted RBP14.8□□□□□ -0.04
NEK9-201ENST00000238616 UQCRFS1P1P0C7P4 283 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 RFC1P35251 1148 aaPredicted RBP14.8□□□□□ -0.04
NEK9-201ENST00000238616 GNAQP50148 359 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.8□□□□□ -0.04
NEK9-201ENST00000238616 RTL1A6NKG5 1358 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 CAPN2P17655 700 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 TSGA10Q9BZW7 698 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 HMG20BQ9P0W2 317 aa14.8□□□□□ -0.04
NEK9-201ENST00000238616 PPFIA1Q13136 1202 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 CTNND2Q9UQB3 1225 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 CDAN1Q8IWY9 1227 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 AFAP1L2Q8N4X5 818 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 SLC39A6Q13433 755 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 PRR16Q569H4 304 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 VWA3AA6NCI4 1184 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 CEBPAP49715 358 aaPredicted RBP14.79□□□□□ -0.04
NEK9-201ENST00000238616 CARD10Q9BWT7 1032 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 FAM114A2Q9NRY5 505 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 ZNF569Q5MCW4 686 aa14.79□□□□□ -0.04
NEK9-201ENST00000238616 PARP1P09874 1014 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms