RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GOLGA8BA8MQT2 603 aa18.93■□□□□ 0.62
UBE3D-201ENST00000237186 IGHMBP2P38935 993 aaKnown RBP18.93■□□□□ 0.62
UBE3D-201ENST00000237186 TBC1D10CQ8IV04 446 aa18.93■□□□□ 0.62
UBE3D-201ENST00000237186 FBXO18Q8NFZ0 1043 aa18.93■□□□□ 0.62
UBE3D-201ENST00000237186 ANGEL1Q9UNK9 670 aaKnown RBP18.93■□□□□ 0.62
UBE3D-201ENST00000237186 NIP7Q9Y221 180 aaKnown RBP eCLIP18.93■□□□□ 0.62
UBE3D-201ENST00000237186 CAVIN2O95810 425 aa18.92■□□□□ 0.62
UBE3D-201ENST00000237186 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
UBE3D-201ENST00000237186 AIDAQ96BJ3 306 aa18.92■□□□□ 0.62
UBE3D-201ENST00000237186 TMEM87BQ96K49 555 aa18.92■□□□□ 0.62
UBE3D-201ENST00000237186 ZNF652Q9Y2D9 606 aa18.92■□□□□ 0.62
UBE3D-201ENST00000237186 SH2B2O14492 632 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-201ENST00000237186 CTAGE5O15320 804 aa18.92■□□□□ 0.62
UBE3D-201ENST00000237186 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-201ENST00000237186 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-201ENST00000237186 RTEL1Q9NZ71 1219 aa18.92■□□□□ 0.62
UBE3D-201ENST00000237186 ARAP2Q8WZ64 1704 aa18.91■□□□□ 0.62
UBE3D-201ENST00000237186 TERF1P54274 439 aa18.91■□□□□ 0.62
UBE3D-201ENST00000237186 C8orf76Q96K31 380 aa18.91■□□□□ 0.62
UBE3D-201ENST00000237186 ANO8Q9HCE9 1232 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-201ENST00000237186 ORC3Q9UBD5 711 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-201ENST00000237186 USP21Q9UK80 565 aa18.91■□□□□ 0.62
UBE3D-201ENST00000237186 MYH7P12883 1935 aa18.91■□□□□ 0.62
UBE3D-201ENST00000237186 AP5Z1O43299 807 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 APPP05067 770 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 SGMS1Q86VZ5 419 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 CKAP2LQ8IYA6 745 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 IFNL3Q8IZI9 196 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 ENGASEQ8NFI3 743 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 PNPLA7Q6ZV29 1317 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 CPLX1O14810 134 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 GNAT2P19087 354 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 SNW1Q13573 536 aaKnown RBP18.9■□□□□ 0.62
UBE3D-201ENST00000237186 CYB5R4Q7L1T6 521 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 CCAR1Q8IX12 1150 aaKnown RBP18.9■□□□□ 0.62
UBE3D-201ENST00000237186 MAGEB6Q8N7X4 407 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
UBE3D-201ENST00000237186 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBE3D-201ENST00000237186 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
UBE3D-201ENST00000237186 SNAP23O00161 211 aa18.89■□□□□ 0.61
UBE3D-201ENST00000237186 GUCY1B3Q02153 619 aa18.89■□□□□ 0.61
UBE3D-201ENST00000237186 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.61
UBE3D-201ENST00000237186 SF3B3Q15393 1217 aaKnown RBP18.89■□□□□ 0.61
UBE3D-201ENST00000237186 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
UBE3D-201ENST00000237186 CDC5LQ99459 802 aaKnown RBP18.89■□□□□ 0.61
UBE3D-201ENST00000237186 EPB41L4AQ9HCS5 686 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-201ENST00000237186 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-201ENST00000237186 HSPA1LP34931 641 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 LIFRP42702 1097 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 CHRNDQ07001 517 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 ANO6Q4KMQ2 910 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 NKX2-3Q8TAU0 364 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 FTOQ9C0B1 505 aaKnown RBP eCLIP18.88■□□□□ 0.61
UBE3D-201ENST00000237186 POLR3EQ9NVU0 708 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 DENND2AQ9ULE3 1009 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
UBE3D-201ENST00000237186 A0A1W2PQ27 194 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 A0A1W2PQ64 194 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 A0A1W2PQD8 194 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 GSG1L2A8MUP6 293 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 CDKL5O76039 1030 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 BCAMP50895 628 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 FOSBP53539 338 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 ADALQ6DHV7 355 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 TDRD7Q8NHU6 1098 aaKnown RBP18.88■□□□□ 0.61
UBE3D-201ENST00000237186 CBX8Q9HC52 389 aa18.88■□□□□ 0.61
UBE3D-201ENST00000237186 ZNF804BA4D1E1 1349 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 KCNQ2O43526 872 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 MBD4O95243 580 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 YEATS4O95619 227 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 TPM3P06753 285 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 FAM160A1Q05DH4 1040 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
UBE3D-201ENST00000237186 APOA5Q6Q788 366 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 LINC00301Q8NCQ3 95 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 MTA3Q9BTC8 594 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 NAPBQ9H115 298 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 CNNM2Q9H8M5 875 aa18.87■□□□□ 0.61
UBE3D-201ENST00000237186 PPFIA3O75145 1194 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 METAP2P50579 478 aaKnown RBP eCLIP18.86■□□□□ 0.61
UBE3D-201ENST00000237186 CCDC73Q6ZRK6 1079 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 KCNG4Q8TDN1 519 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 GOLPH3LQ9H4A5 285 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
UBE3D-201ENST00000237186 ZNF831Q5JPB2 1677 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 B4E1Z4 1266 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 SLC10A5Q5PT55 438 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 MYSM1Q5VVJ2 828 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 CPLX2Q6PUV4 134 aaKnown RBP18.86■□□□□ 0.61
UBE3D-201ENST00000237186 ARMT1Q9H993 441 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 LY9Q9HBG7 655 aa18.86■□□□□ 0.61
UBE3D-201ENST00000237186 NEDD4P46934 1319 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 KIF23Q02241 960 aaPredicted RBP18.85■□□□□ 0.61
UBE3D-201ENST00000237186 UBE4AQ14139 1066 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 NTRK3Q16288 839 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 OTUD7BQ6GQQ9 843 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 NACAP1Q9BZK3 213 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 KRT23Q9C075 422 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms