RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 LRMPQ12912 555 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 GSDMBQ8TAX9 411 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 NLRP12P59046 1061 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 IRX4P78413 519 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 ATP1A2P50993 1020 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 ARID5AQ03989 594 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
PCDH12-201ENST00000231484 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 RNF40O75150 1001 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
PCDH12-201ENST00000231484 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
PCDH12-201ENST00000231484 TRIM6Q9C030 488 aaPredicted RBP13.12□□□□□ -0.31
PCDH12-201ENST00000231484 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
PCDH12-201ENST00000231484 TSC22D3Q99576 134 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
PCDH12-201ENST00000231484 MCM10Q7L590 875 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
PCDH12-201ENST00000231484 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 PPFIA2O75334 1257 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 FERMT1Q9BQL6 677 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 SEL1L2Q5TEA6 688 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 CREB3O43889 395 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
PCDH12-201ENST00000231484 PLEKHM2Q8IWE5 1019 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 THEGQ9P2T0 379 aa13.11□□□□□ -0.31
PCDH12-201ENST00000231484 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 MORC4Q8TE76 937 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 ACTR5Q9H9F9 607 aaPredicted RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 KRT71Q3SY84 523 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 CCDC65Q8IXS2 484 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 RHPN1Q8TCX5 695 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 PPP1R9AQ9ULJ8 1098 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 POLE2P56282 527 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 APBA1Q02410 837 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 IFT88Q13099 833 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 MTX1Q13505 466 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 TRPC3Q13507 836 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 SH3GL3Q99963 347 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 ATP2B3Q16720 1220 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 CFAP221Q4G0U5 840 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 PPARDQ03181 441 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 FLIIQ13045 1269 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 Q9H521 79 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
PCDH12-201ENST00000231484 LONRF2Q1L5Z9 754 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 ZNF287Q9HBT7 754 aa13.1□□□□□ -0.31
PCDH12-201ENST00000231484 STMN1P16949 149 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 CDC25BP30305 580 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 HAND2P61296 217 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 ASIC1P78348 528 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 CTNND2Q9UQB3 1225 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 PPP2R2CQ9Y2T4 447 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 CCDC97Q96F63 343 aaPredicted RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 BICD1Q96G01 975 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 IBTKQ9P2D0 1353 aaPredicted RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 ZBTB43O43298 467 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 TNIP1Q15025 636 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 SCOCQ9UIL1 159 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 NCAPGQ9BPX3 1015 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
PCDH12-201ENST00000231484 DNAI2Q9GZS0 605 aa13.09□□□□□ -0.31
PCDH12-201ENST00000231484 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms