RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 GYS2P54840 703 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 ZNF397Q8NF99 534 aaPredicted RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 GJB4Q9NTQ9 266 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 MAST3O60307 1309 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 CTIFO43310 598 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 FDPSP14324 419 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 PDIA3P30101 505 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 CABP4P57796 275 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 HAND2P61296 217 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 GNL2Q13823 731 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 FBXO38Q6PIJ6 1188 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 PROSER2Q86WR7 435 aaPredicted RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 PLBD2Q8NHP8 589 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 GOLGA6L19H0YKK7 550 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 M0R2C6 588 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 ME1P48163 572 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 PTPN14Q15678 1187 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 CCAR2Q8N163 923 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 ENGASEQ8NFI3 743 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 DCAF5Q96JK2 942 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 ZBTB3Q9H5J0 574 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 THSD7BQ9C0I4 1608 aa10.94□□□□□ -0.66
HLA-DOA-201ENST00000229829 H7C1W4 665 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 TRIM66O15016 1216 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 A1BGP04217 495 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 RAD51AP2Q09MP3 1159 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 HSP90AB3PQ58FF7 597 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 NAA16Q6N069 864 aaPredicted RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 KRBA2Q6ZNG9 492 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 FSIP1Q8NA03 581 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 LLPHQ9BRT6 129 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 A0A1B0GVL5 298 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 LRRC8AQ8IWT6 810 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 DHX40Q8IX18 779 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 OSBP2Q969R2 916 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 CCDC85AQ96PX6 553 aaPredicted RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 AGXT2Q9BYV1 514 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 A0A1B0GUL7 405 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 SOCS7O14512 581 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 IFIT1P09914 478 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 DSCC1Q9BVC3 393 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 HELLSQ9NRZ9 838 aa10.93□□□□□ -0.66
HLA-DOA-201ENST00000229829 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 HMGB1P09429 215 aaKnown RBP10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 CCDC73Q6ZRK6 1079 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 FEZ2Q9UHY8 353 aaPredicted RBP10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 PCDHA7Q9UN72 937 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 RFX7Q2KHR2 1363 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 PALLDQ8WX93 1383 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 BECN2A8MW95 431 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 KINO60870 393 aaKnown RBP10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 STX1AQ16623 288 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 HOMER1Q86YM7 354 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 CCDC191Q8NCU4 936 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 FOXP2O15409 715 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 ERCC6LQ2NKX8 1250 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 RGS22Q8NE09 1264 aa10.92□□□□□ -0.66
HLA-DOA-201ENST00000229829 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 RNF113AO15541 343 aaKnown RBP10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 FAM160A1Q05DH4 1040 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 BARGINQ6ZT62 677 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 AOPEPQ8N6M6 819 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 CCDC34Q96HJ3 373 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 RASSF4Q9H2L5 321 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 CLIC4Q9Y696 253 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 MYH15Q9Y2K3 1946 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 ADORA1P30542 326 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 SARM1Q6SZW1 724 aa10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 CWC25Q9NXE8 425 aaPredicted RBP10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
HLA-DOA-201ENST00000229829 EYA2O00167 538 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 SKILP12757 684 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 NDUFA8P51970 172 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 SCARF1Q14162 830 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 PI16Q6UXB8 463 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 SYT10Q6XYQ8 523 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 DRC1Q96MC2 740 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 MORC2Q9Y6X9 1032 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 IL15P40933 162 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 FMR1NBQ8N0W7 255 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 MRFAP1L1Q96HT8 127 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 DENND2AQ9ULE3 1009 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 CCDC69A6NI79 296 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 CDC25BP30305 580 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 LMAN1P49257 510 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 ZNF274Q96GC6 653 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 ZNF396Q96N95 335 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms