RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CYP21A2P08686 494 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 ZRSR1Q15695 479 aaKnown RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 RCOR1Q9UKL0 485 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 PCDHA7Q9UN72 937 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 DCAF5Q96JK2 942 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 IRX2Q9BZI1 471 aaPredicted RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 A0A087WZG4 1122 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 EFCAB8A8MWE9 144 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 PHACTR2O75167 634 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 GNG11P61952 73 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 LRRFIP1Q32MZ4 808 aaKnown RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 CCDC158Q5M9N0 1113 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 PACS2Q86VP3 889 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 DRC1Q96MC2 740 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 NAT10Q9H0A0 1025 aaKnown RBP16.28■□□□□ 0.2
SF1-201ENST00000227503 ARFGAP3Q9NP61 516 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 IMPACTQ9P2X3 320 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 ABCC6O95255 1503 aa16.27■□□□□ 0.2
SF1-201ENST00000227503 FANCCQ00597 558 aa16.27■□□□□ 0.2
SF1-201ENST00000227503 APOBRQ0VD83 1088 aa16.27■□□□□ 0.2
SF1-201ENST00000227503 PDE11AQ9HCR9 933 aa16.27■□□□□ 0.2
SF1-201ENST00000227503 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.2
SF1-201ENST00000227503 AFDNP55196 1824 aaKnown RBP16.27■□□□□ 0.19
SF1-201ENST00000227503 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 A0A0G2JLW4 131 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 CTDNEP1O95476 244 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.19
SF1-201ENST00000227503 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.19
SF1-201ENST00000227503 EFCC1Q9HA90 598 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 COL18A1P39060 1754 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.19
SF1-201ENST00000227503 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
SF1-201ENST00000227503 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
SF1-201ENST00000227503 DESI2Q9BSY9 194 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 NCAPHQ15003 741 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 GOLGA5Q8TBA6 731 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
SF1-201ENST00000227503 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 GLI3P10071 1580 aa16.26■□□□□ 0.19
SF1-201ENST00000227503 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 DHX58Q96C10 678 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 AK7Q96M32 723 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 KIAA1468Q9P260 1216 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 FOXO4P98177 505 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 CFAP100Q494V2 611 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 NSUN7Q8NE18 718 aaKnown RBP16.25■□□□□ 0.19
SF1-201ENST00000227503 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
SF1-201ENST00000227503 CLIC4Q9Y696 253 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
SF1-201ENST00000227503 E2F4Q16254 413 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 PDILTQ8N807 584 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
SF1-201ENST00000227503 A0A0U1RQJ8 604 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 SERPINC1P01008 464 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 ACTN2P35609 894 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 ICE2Q659A1 982 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 ATRIPQ8WXE1 791 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
SF1-201ENST00000227503 CWC15Q9P013 229 aaKnown RBP16.24■□□□□ 0.19
SF1-201ENST00000227503 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 MYH15Q9Y2K3 1946 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 NRDCO43847 1150 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 ATG9AQ7Z3C6 839 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 GPATCH11Q8N954 259 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 HSD3B7Q9H2F3 369 aa16.24■□□□□ 0.19
SF1-201ENST00000227503 NEDD4P46934 1319 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 H7C1W4 665 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 UBASH3AP57075 661 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
SF1-201ENST00000227503 PPP2R2CQ9Y2T4 447 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 ADAMTSL3P82987 1691 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 PFKFB2O60825 505 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
SF1-201ENST00000227503 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
SF1-201ENST00000227503 CABP4P57796 275 aa16.22■□□□□ 0.19
SF1-201ENST00000227503 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms